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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000009
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 17 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.479s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0101969.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X2 [Cicer arietinum] gi|502081240|ref|XP_004486807.1| chr0 43286011 43294414 -
3 domain predictions
2 GO terms
Lj0g3v0101969.2
n.a. PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X2 [Cicer arietinum] gi|502081240|ref|XP_004486807.1| chr0 43286011 43293409 -
4 domain predictions
2 GO terms
Lj3g3v0300670.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like [Glycine max] gi|356556686|ref|XP_003546654.1| chr3 2146674 2153320 -
3 domain predictions
2 GO terms
Lj3g3v0301720.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X2 [Cicer arietinum] gi|502081240|ref|XP_004486807.1| chr3 2174698 2178284 -
3 domain predictions
2 GO terms
Lj3g3v0301720.2
n.a. PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1 [Cicer arietinum] gi|502081237|ref|XP_004486806.1| chr3 2174698 2178284 -
3 domain predictions
2 GO terms
Lj3g3v3464480.1
n.a. PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like [Glycine max] gi|356526043|ref|XP_003531629.1| chr3 42247404 42249600 -
3 domain predictions
2 GO terms
LotjaGi3g1v0023900.1
n.a. Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; TAIR: AT1G17720.1 Protein phosphatase 2A, regulatory subunit PR55; Swiss-Prot: sp|Q39247|2ABB_ARATH Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform; TrEMBL-Plants: tr|A0A0S3SFT0|A0A0S3SFT0_PHAAN Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Found in the gene: LotjaGi3g1v0023900 LjG1.1_chr3 2628299 2643847 -
4 domain predictions
2 GO terms
LotjaGi3g1v0023900.2
n.a. Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; TAIR: AT1G17720.1 Protein phosphatase 2A, regulatory subunit PR55; Swiss-Prot: sp|Q39247|2ABB_ARATH Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform; TrEMBL-Plants: tr|A0A0S3SFT0|A0A0S3SFT0_PHAAN Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Found in the gene: LotjaGi3g1v0023900 LjG1.1_chr3 2629611 2642168 -
4 domain predictions
2 GO terms
LotjaGi3g1v0023900.3
n.a. Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; TAIR: AT1G17720.2 Protein phosphatase 2A, regulatory subunit PR55; Swiss-Prot: sp|Q39247|2ABB_ARATH Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform; TrEMBL-Plants: tr|A0A0S3SFT0|A0A0S3SFT0_PHAAN Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Found in the gene: LotjaGi3g1v0023900 LjG1.1_chr3 2629611 2643538 -
4 domain predictions
2 GO terms
LotjaGi3g1v0023900.4
n.a. Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; TAIR: AT1G17720.1 Protein phosphatase 2A, regulatory subunit PR55; Swiss-Prot: sp|Q39247|2ABB_ARATH Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform; TrEMBL-Plants: tr|A0A0S3SFT0|A0A0S3SFT0_PHAAN Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Found in the gene: LotjaGi3g1v0023900 LjG1.1_chr3 2629611 2643538 -
4 domain predictions
2 GO terms
LotjaGi3g1v0023900.5
n.a. Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; TAIR: AT1G17720.1 Protein phosphatase 2A, regulatory subunit PR55; Swiss-Prot: sp|Q39247|2ABB_ARATH Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform; TrEMBL-Plants: tr|A0A0S3SFT0|A0A0S3SFT0_PHAAN Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Found in the gene: LotjaGi3g1v0023900 LjG1.1_chr3 2629611 2643538 -
4 domain predictions
2 GO terms
LotjaGi3g1v0023900.6
n.a. Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; TAIR: AT1G17720.2 Protein phosphatase 2A, regulatory subunit PR55; Swiss-Prot: sp|Q39247|2ABB_ARATH Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform; TrEMBL-Plants: tr|I1M5D8|I1M5D8_SOYBN Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Found in the gene: LotjaGi3g1v0023900 LjG1.1_chr3 2629611 2643538 -
4 domain predictions
2 GO terms
LotjaGi3g1v0023900.7
n.a. Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; TAIR: AT1G51690.1 protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform; Swiss-Prot: sp|Q38821|2ABA_ARATH Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform; TrEMBL-Plants: tr|A0A068TPF8|A0A068TPF8_COFCA Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Found in the gene: LotjaGi3g1v0023900 LjG1.1_chr3 2631482 2640344 -
3 domain predictions
2 GO terms
LotjaGi3g1v0427000.1
n.a. Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; TAIR: AT1G17720.2 Protein phosphatase 2A, regulatory subunit PR55; Swiss-Prot: sp|Q39247|2ABB_ARATH Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform; TrEMBL-Plants: tr|A0A0L9TA33|A0A0L9TA33_PHAAN Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Found in the gene: LotjaGi3g1v0427000 LjG1.1_chr3 83776564 83785818 +
4 domain predictions
2 GO terms
LotjaGi3g1v0427000.2
n.a. Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; TAIR: AT1G17720.1 Protein phosphatase 2A, regulatory subunit PR55; Swiss-Prot: sp|Q39247|2ABB_ARATH Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform; TrEMBL-Plants: tr|A0A0S3SZW2|A0A0S3SZW2_PHAAN Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Found in the gene: LotjaGi3g1v0427000 LjG1.1_chr3 83776919 83784620 +
4 domain predictions
2 GO terms
LotjaGi3g1v0427000.3
n.a. Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; TAIR: AT1G51690.2 protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform; Swiss-Prot: sp|Q38821|2ABA_ARATH Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform; TrEMBL-Plants: tr|I1MCY0|I1MCY0_SOYBN Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Found in the gene: LotjaGi3g1v0427000 LjG1.1_chr3 83776919 83784620 +
4 domain predictions
2 GO terms
LotjaGi3g1v0427000.4
n.a. Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; TAIR: AT1G17720.2 Protein phosphatase 2A, regulatory subunit PR55; Swiss-Prot: sp|Q39247|2ABB_ARATH Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform; TrEMBL-Plants: tr|A0A0L9TA33|A0A0L9TA33_PHAAN Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B; Found in the gene: LotjaGi3g1v0427000 LjG1.1_chr3 83778642 83784620 +
4 domain predictions
2 GO terms