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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3541750 |
| Transcript ID | Lj3g3v3541750.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | XIP aquaporin [Lotus japonicus] gi|409168116|emb|CCI69207.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| PANTHER | 1 | 246 | 246 | 1.70E-138 | – | |
| PANTHER | 1 | 246 | 246 | 1.70E-138 | ||
| SUPERFAMILY | 2 | 223 | 222 | 2.09E-29 | ||
| Gene3D | 2 | 225 | 224 | 4.20E-37 | ||
| Phobius | 4 | 15 | 12 | – | – | |
| TMHMM | 5 | 22 | 18 | – | – | |
| Phobius | 16 | 21 | 6 | – | – | |
| Phobius | 22 | 30 | 9 | – | – | |
| Phobius | 31 | 54 | 24 | – | – | |
| TMHMM | 32 | 54 | 23 | – | – | |
| PRINTS | 37 | 61 | 25 | 4.60E-17 | ||
| Pfam | 39 | 220 | 182 | 1.60E-25 | ||
| Phobius | 55 | 74 | 20 | – | – | |
| PRINTS | 74 | 93 | 20 | 4.60E-17 | ||
| Phobius | 75 | 93 | 19 | – | – | |
| TMHMM | 75 | 97 | 23 | – | – | |
| Phobius | 94 | 125 | 32 | – | – | |
| TMHMM | 124 | 146 | 23 | – | – | |
| Phobius | 126 | 146 | 21 | – | – | |
| PRINTS | 129 | 147 | 19 | 4.60E-17 | ||
| Phobius | 147 | 157 | 11 | – | – | |
| TMHMM | 153 | 175 | 23 | – | – | |
| Phobius | 158 | 177 | 20 | – | – | |
| PRINTS | 170 | 192 | 23 | 4.60E-17 | ||
| Phobius | 178 | 208 | 31 | – | – | |
| TMHMM | 205 | 227 | 23 | – | – | |
| Phobius | 209 | 225 | 17 | – | – | |
| PRINTS | 209 | 229 | 21 | 4.60E-17 | ||
| Phobius | 226 | 250 | 25 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj3g3v3541750.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3541750.1, powered by CORGI.
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