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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3653440 |
| Transcript ID | Lj3g3v3653440.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: equilibrative nucleotide transporter 1-like [Cicer arietinum] gi|502179666|ref|XP_004516473.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 21 | 21 | – | – | |
| Phobius | 1 | 1 | 1 | – | – | |
| Phobius | 2 | 12 | 11 | – | – | |
| Pfam | 5 | 246 | 242 | 5.90E-58 | ||
| PANTHER | 5 | 247 | 243 | 2.20E-103 | – | |
| PANTHER | 5 | 247 | 243 | 2.20E-103 | ||
| Phobius | 13 | 21 | 9 | – | – | |
| Phobius | 22 | 30 | 9 | – | – | |
| TMHMM | 30 | 52 | 23 | – | – | |
| Phobius | 31 | 52 | 22 | – | – | |
| Phobius | 53 | 95 | 43 | – | – | |
| TMHMM | 94 | 116 | 23 | – | – | |
| Phobius | 96 | 116 | 21 | – | – | |
| Phobius | 117 | 127 | 11 | – | – | |
| Phobius | 128 | 152 | 25 | – | – | |
| TMHMM | 131 | 153 | 23 | – | – | |
| Phobius | 153 | 163 | 11 | – | – | |
| TMHMM | 160 | 179 | 20 | – | – | |
| Phobius | 164 | 183 | 20 | – | – | |
| Phobius | 184 | 188 | 5 | – | – | |
| TMHMM | 189 | 211 | 23 | – | – | |
| Phobius | 189 | 211 | 23 | – | – | |
| Phobius | 212 | 222 | 11 | – | – | |
| Phobius | 223 | 246 | 24 | – | – | |
| TMHMM | 224 | 246 | 23 | – | – | |
| Phobius | 247 | 247 | 1 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleoside transmembrane transporter activity | Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Nucleoside transmembrane transport | The directed movement of nucleoside across a membrane. |
Expression pattern of Lj3g3v3653440.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3653440.1, powered by CORGI.
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