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Lj3g3v3724410.1

Overview

Field Value
Gene ID Lj3g3v3724410
Transcript ID Lj3g3v3724410.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: F-box protein At5g07670-like [Cicer arietinum] gi|502168974|ref|XP_004514507.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 28 28 – –
PANTHER
PTHR24006
7 34 28 2.90E-35 –
SUPERFAMILY
SSF81383
77 130 54 2.62E-05
IPR001810
PANTHER
PTHR24006
77 152 76 2.90E-35 –
Gene3D
G3DSA:1.20.1280.50
83 114 32 2.70E-05 –
SUPERFAMILY
SSF52047
126 160 35 1.80E-06 –
SUPERFAMILY
SSF52047
190 262 73 1.80E-06 –
PANTHER
PTHR24006
191 466 276 2.90E-35 –
Gene3D
G3DSA:3.80.10.10
194 279 86 5.50E-04
IPR032675
SMART
SM00367
248 279 32 360
IPR006553
SUPERFAMILY
SSF52047
267 467 201 1.10E-25 –
SMART
SM00367
280 304 25 150
IPR006553
Gene3D
G3DSA:3.80.10.10
280 467 188 9.00E-26
IPR032675
SMART
SM00367
356 381 26 50
IPR006553
SMART
SM00367
407 432 26 36
IPR006553

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

Genome browser

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj3g3v3724410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v3724410.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.