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Lj3g3v3752280.1

Overview

Field Value
Gene ID Lj3g3v3752280
Transcript ID Lj3g3v3752280.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable adenylate kinase 2, chloroplastic-like [Cicer arietinum] gi|502146257|ref|XP_004506372.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.50.300
74 287 214 6.20E-75
IPR027417
PANTHER
PTHR23359:SF72
75 290 216 3.50E-106 –
PANTHER
PTHR23359
75 290 216 3.50E-106
IPR000850
Hamap
MF_00235
77 280 204 40.658
IPR000850
TIGRFAM
TIGR01351
78 278 201 1.10E-64
IPR006259
CDD
cd01428
78 271 194 6.72E-77
IPR000850
SUPERFAMILY
SSF52540
78 282 205 2.51E-33
IPR027417
PRINTS
PR00094
80 93 14 4.20E-22
IPR000850
Pfam
PF00406
81 257 177 3.30E-47 –
PRINTS
PR00094
108 122 15 4.20E-22
IPR000850
ProSitePatterns
PS00113
158 169 12 –
IPR033690
PRINTS
PR00094
158 174 17 4.20E-22
IPR000850
PRINTS
PR00094
229 244 16 4.20E-22
IPR000850

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004017
Molecular function Adenylate kinase activity Catalysis of the reaction: ATP + AMP = 2 ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006139
Biological process Nucleobase-containing compound metabolic process Any cellular metabolic process involving nucleobases, nucleosides, nucleotides and nucleic acids.
Subterm of
GO:0016776
Molecular function Phosphotransferase activity, phosphate group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a phosphate group (acceptor).
Subterm of
GO:0019205
Molecular function Nucleobase-containing compound kinase activity Catalysis of the transfer of a phosphate group, usually from ATP or GTP, to a nucleobase, nucleoside, nucleotide or polynucleotide substrate.
Subterm of

Genome browser

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj3g3v3752280.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v3752280.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.