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Lj3g3v3753340.1

Overview

Field Value
Gene ID Lj3g3v3753340
Transcript ID Lj3g3v3753340.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: patellin-3-like [Cicer arietinum] gi|502146269|ref|XP_004506378.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 30 30 – –
PANTHER
PTHR23324:SF48
54 439 386 4.30E-241 –
PANTHER
PTHR23324
54 439 386 4.30E-241 –
SUPERFAMILY
SSF46938
75 153 79 2.62E-14
IPR011074
Gene3D
G3DSA:3.40.525.10
78 374 297 6.30E-67
IPR001251
Pfam
PF03765
84 137 54 2.00E-09
IPR011074
SMART
SM01100
113 138 26 3.20E-06
IPR011074
PRINTS
PR00180
116 138 23 6.80E-05
IPR001071
ProSiteProfiles
PS50191
152 321 170 18.28
IPR001251
SMART
SM00516
156 324 169 2.70E-41
IPR001251
CDD
cd00170
159 322 164 1.28E-39 –
Pfam
PF00650
161 321 161 3.90E-33
IPR001251
SUPERFAMILY
SSF52087
162 330 169 4.45E-41
IPR001251
PRINTS
PR00180
279 298 20 6.80E-05
IPR001071
ProSiteProfiles
PS50866
332 437 106 9.553
IPR009038

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 24

Expression data

Expression pattern

Expression pattern of Lj3g3v3753340.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj3g3v3753340.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.