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| Field | Value |
|---|---|
| Gene ID | Lj3g3v3765450 |
| Transcript ID | Lj3g3v3765450.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like isoform X1 [Cicer arietinum] gi|502146331|ref|XP_004506407.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP | 1 | 12 | 12 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| Phobius | 1 | 2 | 2 | – | – | |
| Phobius | 3 | 13 | 11 | – | – | |
| PANTHER | 11 | 330 | 320 | 2.00E-151 | – | |
| PANTHER | 11 | 330 | 320 | 2.00E-151 | ||
| Phobius | 14 | 24 | 11 | – | – | |
| Phobius | 25 | 103 | 79 | – | – | |
| Coils | 42 | 62 | 21 | – | – | |
| MobiDBLite | 64 | 96 | 33 | – | – | |
| TMHMM | 102 | 124 | 23 | – | – | |
| Phobius | 104 | 124 | 21 | – | – | |
| Phobius | 125 | 144 | 20 | – | – | |
| TMHMM | 145 | 167 | 23 | – | – | |
| Phobius | 145 | 165 | 21 | – | – | |
| Pfam | 162 | 280 | 119 | 1.10E-23 | ||
| Phobius | 166 | 170 | 5 | – | – | |
| Phobius | 171 | 199 | 29 | – | – | |
| TMHMM | 177 | 199 | 23 | – | – | |
| Phobius | 200 | 256 | 57 | – | – | |
| Phobius | 257 | 281 | 25 | – | – | |
| TMHMM | 257 | 279 | 23 | – | – | |
| Phobius | 282 | 300 | 19 | – | – | |
| TMHMM | 299 | 321 | 23 | – | – | |
| Phobius | 301 | 319 | 19 | – | – | |
| Phobius | 320 | 330 | 11 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj3g3v3765450.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj3g3v3765450.1, powered by CORGI.
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