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Lj4g3v0001110.1

Overview

Field Value
Gene ID Lj4g3v0001110
Transcript ID Lj4g3v0001110.1
Lotus japonicus genome version MG20 v3.0
Description NAD(P)-binding Rossmann-fold superfamily protein isoform 1 [Theobroma cacao] gi|508778465|gb|EOY25721.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SUPERFAMILY
SSF51735
11 215 205 1.18E-52
IPR016040
Gene3D
G3DSA:3.40.50.720
11 204 194 2.20E-56
IPR016040
PRINTS
PR00081
13 30 18 1.80E-21
IPR002347
CDD
cd05233
14 230 217 1.28E-50 –
Pfam
PF00106
14 200 187 8.70E-45
IPR002347
PANTHER
PTHR24322:SF500
16 145 130 1.70E-82 –
PANTHER
PTHR24322
16 145 130 1.70E-82
IPR002347
PRINTS
PR00081
87 98 12 1.80E-21
IPR002347
PRINTS
PR00080
87 98 12 6.10E-09
IPR002347
PRINTS
PR00081
135 151 17 1.80E-21
IPR002347
PRINTS
PR00080
141 149 9 6.10E-09
IPR002347
ProSitePatterns
PS00061
148 176 29 –
IPR020904
PRINTS
PR00080
161 180 20 6.10E-09
IPR002347
PRINTS
PR00081
161 180 20 1.80E-21
IPR002347
PANTHER
PTHR24322
161 191 31 1.70E-82
IPR002347
PANTHER
PTHR24322:SF500
161 191 31 1.70E-82 –
PRINTS
PR00081
181 198 18 1.80E-21
IPR002347

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of

Genome browser

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj4g3v0001110.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0001110.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.