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Lj4g3v0015460.1

Overview

Field Value
Gene ID Lj4g3v0015460
Transcript ID Lj4g3v0015460.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max] gi|356522109|ref|XP_003529692.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
25 76 52 – –
ProSiteProfiles
PS51523
87 135 49 14.485
IPR006456
Pfam
PF04770
100 136 37 5.20E-19
IPR006456
ProDom
PD125774
101 139 39 8.00E-16
IPR006456
PANTHER
PTHR31948:SF19
101 311 211 1.60E-99 –
TIGRFAM
TIGR01566
101 136 36 1.30E-20
IPR006456
PANTHER
PTHR31948
101 311 211 1.60E-99 –
Gene3D
G3DSA:1.10.10.60
231 301 71 2.70E-30
IPR009057
SUPERFAMILY
SSF46689
231 300 70 5.73E-19
IPR009057
TIGRFAM
TIGR01565
239 295 57 2.20E-27
IPR006455

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj4g3v0015460.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0015460.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.