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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0119930 |
| Transcript ID | Lj4g3v0119930.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: inositol transporter 4-like [Glycine max] gi|356532347|ref|XP_003534735.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 374 | 374 | 0 | – | |
| PANTHER | 1 | 374 | 374 | 0 | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| SUPERFAMILY | 18 | 375 | 358 | 7.72E-67 | ||
| TIGRFAM | 21 | 372 | 352 | 1.70E-97 | ||
| TMHMM | 29 | 51 | 23 | – | – | |
| ProSiteProfiles | 29 | 544 | 516 | 55.913 | ||
| Phobius | 29 | 54 | 26 | – | – | |
| Pfam | 30 | 368 | 339 | 4.10E-96 | ||
| CDD | 31 | 367 | 337 | 4.73E-30 | ||
| Gene3D | 34 | 217 | 184 | 1.40E-28 | – | |
| PRINTS | 37 | 47 | 11 | 1.40E-27 | ||
| Phobius | 55 | 65 | 11 | – | – | |
| Phobius | 66 | 86 | 21 | – | – | |
| TMHMM | 66 | 88 | 23 | – | – | |
| ProSitePatterns | 86 | 102 | 17 | – | ||
| Phobius | 87 | 97 | 11 | – | – | |
| Phobius | 98 | 116 | 19 | – | – | |
| TMHMM | 101 | 123 | 23 | – | – | |
| Phobius | 117 | 121 | 5 | – | – | |
| Phobius | 122 | 144 | 23 | – | – | |
| PRINTS | 123 | 142 | 20 | 1.40E-27 | ||
| TMHMM | 127 | 145 | 19 | – | – | |
| ProSitePatterns | 128 | 153 | 26 | – | ||
| Phobius | 145 | 155 | 11 | – | – | |
| TMHMM | 152 | 174 | 23 | – | – | |
| Phobius | 156 | 178 | 23 | – | – | |
| Phobius | 179 | 183 | 5 | – | – | |
| TMHMM | 184 | 206 | 23 | – | – | |
| Phobius | 184 | 206 | 23 | – | – | |
| Phobius | 207 | 275 | 69 | – | – | |
| Phobius | 276 | 299 | 24 | – | – | |
| TMHMM | 276 | 298 | 23 | – | – | |
| Gene3D | 280 | 366 | 87 | 8.80E-22 | – | |
| PRINTS | 287 | 297 | 11 | 1.40E-27 | ||
| Phobius | 300 | 313 | 14 | – | – | |
| TMHMM | 313 | 335 | 23 | – | – | |
| Phobius | 314 | 336 | 23 | – | – | |
| ProSitePatterns | 332 | 348 | 17 | – | ||
| Phobius | 337 | 342 | 6 | – | – | |
| Phobius | 343 | 367 | 25 | – | – | |
| TMHMM | 344 | 366 | 23 | – | – | |
| Phobius | 368 | 450 | 83 | – | – | |
| PANTHER | 443 | 577 | 135 | 0 | – | |
| PANTHER | 443 | 577 | 135 | 0 | – | |
| Pfam | 450 | 554 | 105 | 4.30E-26 | ||
| Phobius | 451 | 477 | 27 | – | – | |
| TMHMM | 451 | 473 | 23 | – | – | |
| Gene3D | 452 | 552 | 101 | 8.80E-22 | – | |
| PRINTS | 456 | 477 | 22 | 1.40E-27 | ||
| SUPERFAMILY | 457 | 553 | 97 | 7.72E-67 | ||
| Phobius | 478 | 488 | 11 | – | – | |
| PRINTS | 479 | 491 | 13 | 1.40E-27 | ||
| TMHMM | 486 | 505 | 20 | – | – | |
| Phobius | 489 | 510 | 22 | – | – | |
| Phobius | 511 | 521 | 11 | – | – | |
| TMHMM | 515 | 537 | 23 | – | – | |
| Phobius | 522 | 540 | 19 | – | – | |
| Phobius | 541 | 580 | 40 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0119930.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0119930.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.