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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0135670 |
| Transcript ID | Lj4g3v0135670.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: S-type anion channel SLAH1-like [Cicer arietinum] gi|502149816|ref|XP_004507674.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | – | – | |
| PANTHER | 2 | 347 | 346 | 2.60E-218 | – | |
| PANTHER | 2 | 347 | 346 | 2.60E-218 | – | |
| TMHMM | 21 | 40 | 20 | – | – | |
| Pfam | 22 | 331 | 310 | 1.40E-31 | ||
| Phobius | 24 | 43 | 20 | – | – | |
| Phobius | 44 | 62 | 19 | – | – | |
| Phobius | 63 | 85 | 23 | – | – | |
| TMHMM | 63 | 85 | 23 | – | – | |
| Phobius | 86 | 105 | 20 | – | – | |
| TMHMM | 98 | 118 | 21 | – | – | |
| Phobius | 106 | 125 | 20 | – | – | |
| Phobius | 126 | 130 | 5 | – | – | |
| TMHMM | 128 | 147 | 20 | – | – | |
| Phobius | 131 | 151 | 21 | – | – | |
| Phobius | 152 | 162 | 11 | – | – | |
| TMHMM | 160 | 182 | 23 | – | – | |
| Phobius | 163 | 183 | 21 | – | – | |
| Phobius | 184 | 194 | 11 | – | – | |
| TMHMM | 192 | 211 | 20 | – | – | |
| Phobius | 195 | 211 | 17 | – | – | |
| Phobius | 212 | 222 | 11 | – | – | |
| Phobius | 223 | 242 | 20 | – | – | |
| TMHMM | 223 | 245 | 23 | – | – | |
| Phobius | 243 | 247 | 5 | – | – | |
| Phobius | 248 | 269 | 22 | – | – | |
| TMHMM | 255 | 274 | 20 | – | – | |
| Phobius | 270 | 280 | 11 | – | – | |
| TMHMM | 281 | 298 | 18 | – | – | |
| Phobius | 281 | 298 | 18 | – | – | |
| Phobius | 299 | 309 | 11 | – | – | |
| Phobius | 310 | 335 | 26 | – | – | |
| TMHMM | 313 | 335 | 23 | – | – | |
| Phobius | 336 | 351 | 16 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0135670.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0135670.1, powered by CORGI.
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