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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR004695
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 18 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.524s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0123269.1
n.a. PREDICTED: S-type anion channel SLAH3-like [Glycine max] gi|356561468|ref|XP_003549003.1| chr0 55265185 55268299 +
2 domain predictions
2 GO terms
Lj0g3v0185029.1
n.a. C4-dicarboxylate transporter/malic acid transport protein [Medicago truncatula] gi|357497905|ref|XP_003619241.1| chr0 90052768 90053798 +
2 domain predictions
2 GO terms
Lj0g3v0271409.1
n.a. Tellurite resistance protein tehA-like protein [Medicago truncatula] gi|357476991|ref|XP_003608781.1| chr0 140585053 140588554 -
2 domain predictions
2 GO terms
Lj0g3v0298929.1
n.a. PREDICTED: S-type anion channel SLAH1-like [Glycine max] gi|356562963|ref|XP_003549737.1| chr0 155369838 155372676 +
2 domain predictions
2 GO terms
Lj1g3v2141030.1
n.a. PREDICTED: LOW QUALITY PROTEIN: S-type anion channel SLAH1-like [Glycine max] gi|356518004|ref|XP_003527674.1| chr1 25798000 25800856 +
2 domain predictions
2 GO terms
Lj3g3v2920950.1
n.a. PREDICTED: S-type anion channel SLAH1-like [Cicer arietinum] gi|502145988|ref|XP_004506270.1| chr3 36394783 36396996 +
2 domain predictions
2 GO terms
Lj4g3v0135660.1
n.a. PREDICTED: S-type anion channel SLAH1-like [Cicer arietinum] gi|502149816|ref|XP_004507674.1| chr4 1461718 1464466 +
2 domain predictions
2 GO terms
Lj4g3v0135670.1
n.a. PREDICTED: S-type anion channel SLAH1-like [Cicer arietinum] gi|502149816|ref|XP_004507674.1| chr4 1461806 1463419 +
2 domain predictions
2 GO terms
LotjaGi1g1v0424700.1
n.a. S-type anion channel; TAIR: AT1G62280.1 SLAC1 homologue 1; Swiss-Prot: sp|Q5E930|SLAH1_ARATH S-type anion channel SLAH1; TrEMBL-Plants: tr|A0A072VDH8|A0A072VDH8_MEDTR C4-dicarboxylate transporter/malic acid protein; Found in the gene: LotjaGi1g1v0424700 LjG1.1_chr1 91927378 91930361 +
2 domain predictions
2 GO terms
LotjaGi2g1v0137900.1
n.a. S-type anion channel; TAIR: AT5G24030.1 SLAC1 homologue 3; Swiss-Prot: sp|Q9FLV9|SLAH3_ARATH S-type anion channel SLAH3; TrEMBL-Plants: tr|I1MPD1|I1MPD1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0137900 LjG1.1_chr2 50384176 50389047 -
2 domain predictions
2 GO terms
LotjaGi2g1v0137900.2
n.a. S-type anion channel; TAIR: AT5G24030.1 SLAC1 homologue 3; Swiss-Prot: sp|Q9FLV9|SLAH3_ARATH S-type anion channel SLAH3; TrEMBL-Plants: tr|I1MPD1|I1MPD1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0137900 LjG1.1_chr2 50384176 50389047 -
2 domain predictions
2 GO terms
LotjaGi3g1v0468300.1
n.a. S-type anion channel; TAIR: AT1G62280.1 SLAC1 homologue 1; Swiss-Prot: sp|Q5E930|SLAH1_ARATH S-type anion channel SLAH1; TrEMBL-Plants: tr|A0A1J7HFJ3|A0A1J7HFJ3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0468300 LjG1.1_chr3 88392610 88395013 +
2 domain predictions
2 GO terms
LotjaGi3g1v0468900_LC.1
n.a. S-type anion channel; TAIR: AT1G62280.1 SLAC1 homologue 1; Swiss-Prot: sp|Q5E930|SLAH1_ARATH S-type anion channel SLAH1; TrEMBL-Plants: tr|G7JEQ3|G7JEQ3_MEDTR C4-dicarboxylate transporter/malic acid protein; Found in the gene: LotjaGi3g1v0468900_LC LjG1.1_chr3 88451661 88453643 -
2 domain predictions
2 GO terms
LotjaGi4g1v0012300.1
n.a. S-type anion channel; TAIR: AT1G62280.1 SLAC1 homologue 1; Swiss-Prot: sp|Q5E930|SLAH1_ARATH S-type anion channel SLAH1; TrEMBL-Plants: tr|I3SDT0|I3SDT0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0012300 LjG1.1_chr4 1518455 1523577 +
2 domain predictions
2 GO terms
LotjaGi4g1v0012300.2
n.a. S-type anion channel; TAIR: AT1G62280.1 SLAC1 homologue 1; Swiss-Prot: sp|Q5E930|SLAH1_ARATH S-type anion channel SLAH1; TrEMBL-Plants: tr|I3SDT0|I3SDT0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0012300 LjG1.1_chr4 1518462 1523266 +
2 domain predictions
2 GO terms
LotjaGi4g1v0012300.3
n.a. S-type anion channel; TAIR: AT1G62280.1 SLAC1 homologue 1; Swiss-Prot: sp|Q5E930|SLAH1_ARATH S-type anion channel SLAH1; TrEMBL-Plants: tr|I3SDT0|I3SDT0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0012300 LjG1.1_chr4 1518574 1523126 +
2 domain predictions
2 GO terms
LotjaGi4g1v0012300.4
n.a. S-type anion channel; TAIR: AT1G62280.1 SLAC1 homologue 1; Swiss-Prot: sp|Q5E930|SLAH1_ARATH S-type anion channel SLAH1; TrEMBL-Plants: tr|I3SDT0|I3SDT0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0012300 LjG1.1_chr4 1518579 1521216 +
2 domain predictions
2 GO terms
LotjaGi4g1v0211700.1
n.a. S-type anion channel; TAIR: AT1G12480.1 C4-dicarboxylate transporter/malic acid transport protein; Swiss-Prot: sp|Q9LD83|SLAC1_ARATH Guard cell S-type anion channel SLAC1; TrEMBL-Plants: tr|G7JK66|G7JK66_MEDTR C4-dicarboxylate transporter/malic acid protein; Found in the gene: LotjaGi4g1v0211700 LjG1.1_chr4 49269405 49273334 +
2 domain predictions
2 GO terms