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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0299420 |
| Transcript ID | Lj4g3v0299420.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Fatty acid 2-hydroxylase [Medicago truncatula] gi|357448649|ref|XP_003594600.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 236 | 236 | 2.00E-187 | – | |
| PANTHER | 1 | 236 | 236 | 2.00E-187 | – | |
| Phobius | 1 | 48 | 48 | – | – | |
| Phobius | 49 | 71 | 23 | – | – | |
| TMHMM | 49 | 71 | 23 | – | – | |
| Phobius | 72 | 82 | 11 | – | – | |
| TMHMM | 78 | 97 | 20 | – | – | |
| Phobius | 83 | 101 | 19 | – | – | |
| Pfam | 87 | 226 | 140 | 7.10E-16 | ||
| Phobius | 102 | 135 | 34 | – | – | |
| Phobius | 136 | 154 | 19 | – | – | |
| TMHMM | 136 | 154 | 19 | – | – | |
| Phobius | 155 | 165 | 11 | – | – | |
| Phobius | 166 | 184 | 19 | – | – | |
| Phobius | 185 | 237 | 53 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion binding | Interacting selectively and non-covalently with iron (Fe) ions. | ||
| Biological process | Lipid biosynthetic process | The chemical reactions and pathways resulting in the formation of lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj4g3v0299420.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0299420.1, powered by CORGI.
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