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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0336150 |
| Transcript ID | Lj4g3v0336150.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: auxin-induced protein 5NG4-like [Glycine max] gi|356528066|ref|XP_003532626.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | – | – | |
| Phobius | 1 | 28 | 28 | – | – | |
| PANTHER | 4 | 362 | 359 | 3.60E-218 | – | |
| PANTHER | 4 | 362 | 359 | 3.60E-218 | ||
| TMHMM | 12 | 34 | 23 | – | – | |
| Pfam | 15 | 157 | 143 | 8.70E-12 | ||
| Phobius | 16 | 23 | 8 | – | – | |
| Phobius | 24 | 28 | 5 | – | – | |
| Phobius | 29 | 43 | 15 | – | – | |
| Phobius | 44 | 66 | 23 | – | – | |
| TMHMM | 44 | 66 | 23 | – | – | |
| SUPERFAMILY | 50 | 157 | 108 | 4.05E-05 | – | |
| Phobius | 67 | 77 | 11 | – | – | |
| Phobius | 78 | 100 | 23 | – | – | |
| TMHMM | 79 | 101 | 23 | – | – | |
| Phobius | 101 | 105 | 5 | – | – | |
| TMHMM | 106 | 128 | 23 | – | – | |
| Phobius | 106 | 129 | 24 | – | – | |
| Phobius | 130 | 140 | 11 | – | – | |
| Phobius | 141 | 159 | 19 | – | – | |
| TMHMM | 145 | 167 | 23 | – | – | |
| Phobius | 160 | 194 | 35 | – | – | |
| TMHMM | 195 | 213 | 19 | – | – | |
| Phobius | 195 | 214 | 20 | – | – | |
| Pfam | 196 | 334 | 139 | 1.50E-14 | ||
| Phobius | 215 | 225 | 11 | – | – | |
| TMHMM | 225 | 247 | 23 | – | – | |
| Phobius | 226 | 245 | 20 | – | – | |
| Phobius | 246 | 264 | 19 | – | – | |
| SUPERFAMILY | 254 | 339 | 86 | 1.44E-10 | – | |
| TMHMM | 262 | 284 | 23 | – | – | |
| Phobius | 265 | 284 | 20 | – | – | |
| Phobius | 285 | 290 | 6 | – | – | |
| TMHMM | 289 | 311 | 23 | – | – | |
| Phobius | 291 | 310 | 20 | – | – | |
| Phobius | 311 | 315 | 5 | – | – | |
| TMHMM | 316 | 335 | 20 | – | – | |
| Phobius | 316 | 334 | 19 | – | – | |
| Phobius | 335 | 362 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0336150.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0336150.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.