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Lj4g3v0340710.1

Overview

Field Value
Gene ID Lj4g3v0340710
Transcript ID Lj4g3v0340710.1
Lotus japonicus genome version MG20 v3.0
Description Uncharacterized protein TCM_007521 [Theobroma cacao] gi|508706945|gb|EOX98841.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 71 71
MobiDBLite 1 34 34
PANTHER 33 277 245 1.70E-205
PANTHER 33 277 245 1.70E-205
Pfam 67 377 311 1.70E-62
Phobius 72 91 20
Phobius 92 110 19
Phobius 111 128 18
Phobius 129 410 282
PANTHER 299 410 112 1.70E-205
PANTHER 299 410 112 1.70E-205

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj4g3v0340710.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v0340710.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.