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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0341170 |
| Transcript ID | Lj4g3v0341170.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Tobamovirus multiplication 1 isoform 1 [Theobroma cacao] gi|508706891|gb|EOX98787.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 39 | 39 | – | – | |
| PANTHER | 11 | 294 | 284 | 2.50E-211 | – | |
| PANTHER | 11 | 294 | 284 | 2.50E-211 | – | |
| Pfam | 24 | 294 | 271 | 4.20E-133 | ||
| Phobius | 40 | 64 | 25 | – | – | |
| TMHMM | 40 | 57 | 18 | – | – | |
| Phobius | 65 | 75 | 11 | – | – | |
| Phobius | 76 | 95 | 20 | – | – | |
| TMHMM | 77 | 99 | 23 | – | – | |
| Phobius | 96 | 114 | 19 | – | – | |
| TMHMM | 109 | 131 | 23 | – | – | |
| Phobius | 115 | 134 | 20 | – | – | |
| Phobius | 135 | 145 | 11 | – | – | |
| TMHMM | 144 | 166 | 23 | – | – | |
| Phobius | 146 | 165 | 20 | – | – | |
| Phobius | 166 | 176 | 11 | – | – | |
| Phobius | 177 | 197 | 21 | – | – | |
| TMHMM | 181 | 203 | 23 | – | – | |
| Phobius | 198 | 217 | 20 | – | – | |
| Phobius | 218 | 240 | 23 | – | – | |
| TMHMM | 219 | 241 | 23 | – | – | |
| Phobius | 241 | 259 | 19 | – | – | |
| TMHMM | 256 | 278 | 23 | – | – | |
| Phobius | 260 | 278 | 19 | – | – | |
| Phobius | 279 | 294 | 16 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj4g3v0341170.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0341170.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.