Domain Predictions — View

Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

PF06454

Source: Pfam

Description

Protein of unknown function (DUF1084)

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 12

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0263019.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tobamovirus multiplication protein [Arachis hypogaea] gi\|167178797\|gb\|ABZ11029.1\|	Domains CYTOPLASMIC_DOMAIN IPR009457 NON_CYTOPLASMIC_DOMAIN PF06454 PTHR31142 PTHR31142:SF3 TMhelix TRANSMEMBRANE	8
Lj4g3v0166340.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tobamovirus multiplication protein 3 isoform 2, partial [Theobroma cacao] gi\|508709518\|gb\|EOY01415.1\|	Domains CYTOPLASMIC_DOMAIN IPR009457 NON_CYTOPLASMIC_DOMAIN PF06454 PTHR31142 PTHR31142:SF3 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION TMhelix TRANSMEMBRANE	12
Lj4g3v0268700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Uncharacterized protein isoform 3 [Theobroma cacao] gi\|508780492\|gb\|EOY27748.1\|	Domains CYTOPLASMIC_DOMAIN IPR009457 NON_CYTOPLASMIC_DOMAIN PF06454 PTHR31142 PTHR31142:SF4 TMhelix TRANSMEMBRANE	8
Lj4g3v0341170.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tobamovirus multiplication 1 isoform 1 [Theobroma cacao] gi\|508706891\|gb\|EOX98787.1\|	Domains CYTOPLASMIC_DOMAIN IPR009457 NON_CYTOPLASMIC_DOMAIN PF06454 PTHR31142 PTHR31142:SF5 TMhelix TRANSMEMBRANE	8
Lj6g3v1879850.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tobamovirus multiplication 1 isoform 1 [Theobroma cacao] gi\|508781403\|gb\|EOY28659.1\|	Domains CYTOPLASMIC_DOMAIN IPR009457 NON_CYTOPLASMIC_DOMAIN PF06454 PTHR31142 PTHR31142:SF6 TMhelix TRANSMEMBRANE	8
LotjaGi2g1v0007100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tobamovirus multiplication protein 3; TAIR: AT2G02180.1 tobamovirus multiplication protein 3; Swiss-Prot: sp\|Q9ZUM2\|TOM3_ARATH Tobamovirus multiplication protein 3; TrEMBL-Plants: tr\|A0A0R0JAR5\|A0A0R0JAR5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0007100	Domains CYTOPLASMIC_DOMAIN IPR009457 IPR040226 NON_CYTOPLASMIC_DOMAIN PF06454 PTHR31142 PTHR31142:SF3 TMhelix TRANSMEMBRANE	9
LotjaGi4g1v0015900.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tobamovirus multiplication protein 1; TAIR: AT4G21790.1 tobamovirus multiplication 1; Swiss-Prot: sp\|Q402F4\|TOM1_TOBAC Tobamovirus multiplication protein 1; TrEMBL-Plants: tr\|I1MR67\|I1MR67_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0015900	Domains CYTOPLASMIC_DOMAIN IPR009457 IPR040226 NON_CYTOPLASMIC_DOMAIN PF06454 PTHR31142 PTHR31142:SF25 TMhelix TRANSMEMBRANE	9
LotjaGi4g1v0017300.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tobamovirus multiplication-like protein; TAIR: AT2G02180.1 tobamovirus multiplication protein 3; Swiss-Prot: sp\|Q9ZUM2\|TOM3_ARATH Tobamovirus multiplication protein 3; TrEMBL-Plants: tr\|I3SRC8\|I3SRC8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0017300	Domains CYTOPLASMIC_DOMAIN IPR009457 IPR040226 NON_CYTOPLASMIC_DOMAIN PF06454 PTHR31142 PTHR31142:SF24 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION TMhelix TRANSMEMBRANE	13
LotjaGi4g1v0024400.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tobamovirus multiplication protein 1; TAIR: AT3G59090.1 tobamovirus multiplication protein; Swiss-Prot: sp\|Q9FEG2\|TOM1_ARATH Tobamovirus multiplication protein 1; TrEMBL-Plants: tr\|K7L5J4\|K7L5J4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0024400	Domains CYTOPLASMIC_DOMAIN IPR009457 IPR040226 NON_CYTOPLASMIC_DOMAIN PF06454 PTHR31142 PTHR31142:SF4 TMhelix TRANSMEMBRANE	9
LotjaGi4g1v0035200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tobamovirus multiplication protein 1; TAIR: AT4G21790.1 tobamovirus multiplication 1; Swiss-Prot: sp\|Q9FEG2\|TOM1_ARATH Tobamovirus multiplication protein 1; TrEMBL-Plants: tr\|I1KR24\|I1KR24_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0035200	Domains CYTOPLASMIC_DOMAIN IPR009457 IPR040226 NON_CYTOPLASMIC_DOMAIN PF06454 PTHR31142 PTHR31142:SF22 TMhelix TRANSMEMBRANE	9
LotjaGi6g1v0295700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	TOBAMOVIRUS MULTIPLICATION 1 family protein; TAIR: AT4G21790.1 tobamovirus multiplication 1; Swiss-Prot: sp\|Q402F4\|TOM1_TOBAC Tobamovirus multiplication protein 1; TrEMBL-Plants: tr\|B9RXN6\|B9RXN6_RICCO Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0295700	Domains CYTOPLASMIC_DOMAIN IPR009457 IPR040226 NON_CYTOPLASMIC_DOMAIN PF06454 PTHR31142 PTHR31142:SF25 TMhelix TRANSMEMBRANE	9
LotjaGi6g1v0295700.2 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Tobamovirus multiplication protein 1; TAIR: AT4G21790.1 tobamovirus multiplication 1; Swiss-Prot: sp\|Q402F4\|TOM1_TOBAC Tobamovirus multiplication protein 1; TrEMBL-Plants: tr\|A0A067G7B6\|A0A067G7B6_CITSI Uncharacterized protein; Found in the gene: LotjaGi6g1v0295700	Domains CYTOPLASMIC_DOMAIN IPR009457 IPR040226 NON_CYTOPLASMIC_DOMAIN PF06454 PTHR31142 PTHR31142:SF25 TMhelix TRANSMEMBRANE	9

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	8.33