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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0363530 |
| Transcript ID | Lj4g3v0363530.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic-like [Glycine max] gi|356528024|ref|XP_003532605.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 144 | 144 | 1.00E-93 | – | |
| PANTHER | 1 | 144 | 144 | 1.00E-93 | – | |
| Phobius | 1 | 5 | 5 | – | – | |
| CDD | 6 | 130 | 125 | 1.61E-17 | – | |
| Phobius | 6 | 31 | 26 | – | – | |
| Pfam | 9 | 111 | 103 | 5.50E-09 | ||
| TMHMM | 10 | 32 | 23 | – | – | |
| Phobius | 32 | 51 | 20 | – | – | |
| Phobius | 52 | 71 | 20 | – | – | |
| TMHMM | 53 | 72 | 20 | – | – | |
| Phobius | 72 | 76 | 5 | – | – | |
| TMHMM | 76 | 98 | 23 | – | – | |
| Phobius | 77 | 96 | 20 | – | – | |
| Phobius | 97 | 116 | 20 | – | – | |
| Phobius | 117 | 137 | 21 | – | – | |
| TMHMM | 119 | 141 | 23 | – | – | |
| Phobius | 138 | 148 | 11 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring alkyl or aryl (other than methyl) groups | Catalysis of the transfer of an alkyl or aryl (but not methyl) group from one compound (donor) to another (acceptor). |
Expression pattern of Lj4g3v0363530.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0363530.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.