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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0548830 |
| Transcript ID | Lj4g3v0548830.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: centromere-associated protein E-like isoform X1 [Cicer arietinum] gi|502143001|ref|XP_004505179.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 143 | 143 | – | – | |
| PANTHER | 117 | 561 | 445 | 0 | ||
| PANTHER | 117 | 561 | 445 | 0 | – | |
| SMART | 190 | 537 | 348 | 3.30E-160 | ||
| CDD | 191 | 539 | 349 | 2.11E-170 | – | |
| Gene3D | 191 | 538 | 348 | 7.00E-127 | ||
| SUPERFAMILY | 192 | 565 | 374 | 8.35E-120 | ||
| ProSiteProfiles | 192 | 529 | 338 | 122.468 | ||
| Pfam | 198 | 529 | 332 | 3.30E-110 | ||
| PRINTS | 264 | 285 | 22 | 6.70E-40 | ||
| PRINTS | 393 | 410 | 18 | 6.70E-40 | ||
| ProSitePatterns | 425 | 436 | 12 | – | ||
| PRINTS | 426 | 444 | 19 | 6.70E-40 | ||
| PRINTS | 479 | 500 | 22 | 6.70E-40 | ||
| Coils | 543 | 563 | 21 | – | – | |
| PANTHER | 601 | 759 | 159 | 0 | – | |
| PANTHER | 601 | 759 | 159 | 0 | ||
| Coils | 625 | 659 | 35 | – | – | |
| Coils | 722 | 742 | 21 | – | – | |
| Coils | 784 | 804 | 21 | – | – | |
| Coils | 904 | 976 | 73 | – | – | |
| PANTHER | 1050 | 1084 | 35 | 0 | ||
| PANTHER | 1050 | 1084 | 35 | 0 | – | |
| Coils | 1063 | 1083 | 21 | – | – | |
| Coils | 1162 | 1182 | 21 | – | – | |
| Coils | 1292 | 1319 | 28 | – | – | |
| MobiDBLite | 1370 | 1406 | 37 | – | – | |
| Coils | 1446 | 1480 | 35 | – | – | |
| Coils | 1580 | 1600 | 21 | – | – | |
| Coils | 1913 | 1968 | 56 | – | – | |
| Coils | 1972 | 1999 | 28 | – | – | |
| Coils | 2081 | 2118 | 38 | – | – | |
| Coils | 2126 | 2146 | 21 | – | – | |
| Coils | 2161 | 2181 | 21 | – | – | |
| Coils | 2203 | 2328 | 126 | – | – | |
| PANTHER | 2223 | 2407 | 185 | 0 | ||
| PANTHER | 2223 | 2407 | 185 | 0 | – | |
| Coils | 2336 | 2363 | 28 | – | – | |
| Coils | 2375 | 2402 | 28 | – | – | |
| MobiDBLite | 2400 | 2427 | 28 | – | – | |
| Coils | 2442 | 2476 | 35 | – | – | |
| PANTHER | 2447 | 2522 | 76 | 0 | ||
| PANTHER | 2447 | 2522 | 76 | 0 | – | |
| Coils | 2531 | 2607 | 77 | – | – | |
| PANTHER | 2538 | 2666 | 129 | 0 | – | |
| PANTHER | 2538 | 2666 | 129 | 0 | ||
| Coils | 2617 | 2640 | 24 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Microtubule motor activity | Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Microtubule-based movement | A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules. | ||
| Molecular function | Microtubule binding | Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers. |
Expression pattern of Lj4g3v0548830.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0548830.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.