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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0588840 |
| Transcript ID | Lj4g3v0588840.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | ferredoxin-nitrite reductase [Lotus japonicus] gi|9968473|emb|CAC06095.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 318 | 318 | 1.20E-188 | – | |
| PANTHER | 1 | 318 | 318 | 1.20E-188 | – | |
| Pfam | 4 | 84 | 81 | 3.70E-22 | ||
| Gene3D | 4 | 91 | 88 | 2.60E-24 | – | |
| SUPERFAMILY | 4 | 86 | 83 | 4.97E-24 | – | |
| SUPERFAMILY | 65 | 202 | 138 | 1.80E-24 | ||
| Gene3D | 105 | 174 | 70 | 1.30E-17 | ||
| Pfam | 113 | 175 | 63 | 1.90E-19 | ||
| SUPERFAMILY | 190 | 302 | 113 | 2.09E-29 | – | |
| Gene3D | 190 | 302 | 113 | 8.50E-31 | – | |
| PRINTS | 191 | 209 | 19 | 1.10E-11 | ||
| Pfam | 192 | 302 | 111 | 3.90E-11 | ||
| ProSitePatterns | 235 | 251 | 17 | – | ||
| PRINTS | 235 | 253 | 19 | 1.10E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Molecular function | Iron-sulfur cluster binding | Interacting selectively and non-covalently with an iron-sulfur cluster, a combination of iron and sulfur atoms. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj4g3v0588840.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0588840.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.