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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0643640 |
| Transcript ID | Lj4g3v0643640.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable sulfate transporter 3.3-like [Glycine max] gi|356521546|ref|XP_003529415.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 259 | 259 | 1.40E-193 | ||
| PANTHER | 1 | 259 | 259 | 1.40E-193 | ||
| Phobius | 1 | 103 | 103 | – | – | |
| Pfam | 77 | 258 | 182 | 1.00E-59 | ||
| Phobius | 104 | 123 | 20 | – | – | |
| Phobius | 124 | 128 | 5 | – | – | |
| Phobius | 129 | 145 | 17 | – | – | |
| Phobius | 146 | 156 | 11 | – | – | |
| TMHMM | 156 | 178 | 23 | – | – | |
| Phobius | 157 | 181 | 25 | – | – | |
| Phobius | 182 | 186 | 5 | – | – | |
| TMHMM | 182 | 204 | 23 | – | – | |
| Phobius | 187 | 206 | 20 | – | – | |
| Phobius | 207 | 212 | 6 | – | – | |
| TMHMM | 211 | 233 | 23 | – | – | |
| Phobius | 213 | 232 | 20 | – | – | |
| Phobius | 233 | 237 | 5 | – | – | |
| TMHMM | 238 | 255 | 18 | – | – | |
| Phobius | 238 | 256 | 19 | – | – | |
| Phobius | 257 | 259 | 3 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Secondary active sulfate transmembrane transporter activity | Enables the secondary active transfer of sulfate from one side of a membrane to the other. Secondary active transport is the transfer of a solute across a membrane, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters. | ||
| Biological process | Sulfate transport | The directed movement of sulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Molecular function | Sulfate transmembrane transporter activity | Enables the transfer of sulfate ions, SO4(2-), from one side of a membrane to the other. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0643640.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0643640.1, powered by CORGI.
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