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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0643850 |
| Transcript ID | Lj4g3v0643850.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: mitochondrial import inner membrane translocase subunit Tim17-like [Glycine max] gi|356575929|ref|XP_003556088.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 217 | 217 | 1.70E-120 | ||
| Phobius | 1 | 65 | 65 | – | – | |
| PANTHER | 1 | 217 | 217 | 1.70E-120 | – | |
| Pfam | 16 | 122 | 107 | 2.90E-24 | ||
| Phobius | 66 | 83 | 18 | – | – | |
| Phobius | 84 | 89 | 6 | – | – | |
| Phobius | 90 | 109 | 20 | – | – | |
| Phobius | 110 | 114 | 5 | – | – | |
| Phobius | 115 | 137 | 23 | – | – | |
| Phobius | 138 | 217 | 80 | – | – | |
| MobiDBLite | 166 | 217 | 52 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | TIM23 mitochondrial import inner membrane translocase complex | The protein transport machinery of the mitochondrial inner membrane that typically transports proteins that possess a matrix-targeting N-terminal presequence. The TIM23 complex contains three essential Tim proteins: Tim17 and Tim23 are thought to build a preprotein translocation channel while Tim44 interacts transiently with the matrix heat-shock protein Hsp70 to form an ATP-driven import motor. | ||
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. | ||
| Molecular function | P-P-bond-hydrolysis-driven protein transmembrane transporter activity | Primary active carrier-mediated transport of a protein across a membrane, driven by the hydrolysis of the diphosphate bond of inorganic pyrophosphate, ATP, or another nucleoside triphosphate. The transport protein may or may not be transiently phosphorylated, but the substrate is not phosphorylated. |
Expression pattern of Lj4g3v0643850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0643850.1, powered by CORGI.
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