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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0668050 |
| Transcript ID | Lj4g3v0668050.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Protein argonaute [Medicago truncatula] gi|357475141|ref|XP_003607856.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 198 | 198 | – | – | |
| PANTHER | 112 | 203 | 92 | 0 | – | |
| PANTHER | 112 | 203 | 92 | 0 | – | |
| MobiDBLite | 205 | 224 | 20 | – | – | |
| PANTHER | 227 | 1101 | 875 | 0 | – | |
| PANTHER | 227 | 1101 | 875 | 0 | – | |
| Pfam | 251 | 387 | 137 | 2.80E-18 | ||
| SMART | 397 | 450 | 54 | 2.20E-07 | ||
| Pfam | 399 | 448 | 50 | 8.00E-06 | ||
| Gene3D | 447 | 569 | 123 | 4.00E-21 | – | |
| SUPERFAMILY | 447 | 604 | 158 | 2.04E-30 | ||
| CDD | 451 | 565 | 115 | 1.51E-17 | – | |
| SMART | 451 | 583 | 133 | 4.30E-04 | ||
| Pfam | 467 | 575 | 109 | 8.90E-18 | ||
| ProSiteProfiles | 480 | 566 | 87 | 16.94 | ||
| Pfam | 593 | 639 | 47 | 5.70E-09 | ||
| CDD | 612 | 1050 | 439 | 4.36E-168 | – | |
| Gene3D | 660 | 809 | 150 | 8.60E-08 | – | |
| SUPERFAMILY | 736 | 1051 | 316 | 1.39E-75 | ||
| SMART | 752 | 1051 | 300 | 1.20E-105 | ||
| ProSiteProfiles | 752 | 1051 | 300 | 36.131 | ||
| Pfam | 753 | 1049 | 297 | 2.90E-86 | ||
| Gene3D | 825 | 1043 | 219 | 4.40E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. | ||
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v0668050.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0668050.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.