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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0772170 |
| Transcript ID | Lj4g3v0772170.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: aspartic proteinase-like protein 2-like [Glycine max] gi|356565521|ref|XP_003550988.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 7 | 7 | – | – | |
| SignalP | 1 | 27 | 27 | – | – | |
| Phobius | 1 | 24 | 24 | – | – | |
| Phobius | 8 | 19 | 12 | – | – | |
| Phobius | 20 | 24 | 5 | – | – | |
| Phobius | 25 | 590 | 566 | – | – | |
| PANTHER | 40 | 438 | 399 | 3.50E-253 | – | |
| PANTHER | 40 | 438 | 399 | 3.50E-253 | ||
| MobiDBLite | 52 | 74 | 23 | – | – | |
| SUPERFAMILY | 84 | 435 | 352 | 5.30E-90 | ||
| Gene3D | 85 | 253 | 169 | 2.70E-37 | ||
| CDD | 87 | 430 | 344 | 5.49E-78 | – | |
| Pfam | 88 | 252 | 165 | 2.80E-37 | ||
| ProSiteProfiles | 88 | 426 | 339 | 46.086 | ||
| PRINTS | 94 | 114 | 21 | 5.10E-08 | ||
| ProSitePatterns | 103 | 114 | 12 | – | ||
| PRINTS | 246 | 259 | 14 | 5.10E-08 | ||
| Gene3D | 266 | 434 | 169 | 2.70E-38 | ||
| Pfam | 272 | 425 | 154 | 1.20E-32 | ||
| PRINTS | 299 | 310 | 12 | 5.10E-08 | ||
| PRINTS | 402 | 417 | 16 | 5.10E-08 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Aspartic-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which a water molecule bound by the side chains of aspartic residues at the active center acts as a nucleophile. | ||
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
Expression pattern of Lj4g3v0772170.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0772170.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.