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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0937740 |
| Transcript ID | Lj4g3v0937740.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable polyol transporter 3-like [Cicer arietinum] gi|502153311|ref|XP_004509296.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 32 | 32 | – | – | |
| CDD | 1 | 438 | 438 | 1.37E-25 | ||
| ProSiteProfiles | 1 | 443 | 443 | 49.894 | ||
| PANTHER | 1 | 462 | 462 | 0 | – | |
| PANTHER | 1 | 462 | 462 | 0 | – | |
| Pfam | 3 | 454 | 452 | 7.50E-106 | ||
| PRINTS | 3 | 13 | 11 | 5.50E-21 | ||
| SUPERFAMILY | 3 | 198 | 196 | 5.23E-63 | ||
| TIGRFAM | 3 | 450 | 448 | 7.70E-99 | ||
| Gene3D | 4 | 177 | 174 | 2.20E-27 | – | |
| Phobius | 33 | 50 | 18 | – | – | |
| TMHMM | 33 | 50 | 18 | – | – | |
| ProSitePatterns | 49 | 66 | 18 | – | ||
| Phobius | 51 | 61 | 11 | – | – | |
| TMHMM | 60 | 82 | 23 | – | – | |
| Phobius | 62 | 80 | 19 | – | – | |
| Phobius | 81 | 85 | 5 | – | – | |
| PRINTS | 86 | 105 | 20 | 5.50E-21 | ||
| Phobius | 86 | 106 | 21 | – | – | |
| TMHMM | 87 | 109 | 23 | – | – | |
| ProSitePatterns | 91 | 116 | 26 | – | ||
| Phobius | 107 | 117 | 11 | – | – | |
| Phobius | 118 | 136 | 19 | – | – | |
| TMHMM | 119 | 141 | 23 | – | – | |
| Phobius | 137 | 147 | 11 | – | – | |
| Phobius | 148 | 171 | 24 | – | – | |
| TMHMM | 148 | 170 | 23 | – | – | |
| Phobius | 172 | 287 | 116 | – | – | |
| SUPERFAMILY | 226 | 451 | 226 | 5.23E-63 | ||
| Gene3D | 252 | 451 | 200 | 3.50E-16 | – | |
| PRINTS | 261 | 271 | 11 | 5.50E-21 | ||
| Phobius | 288 | 309 | 22 | – | – | |
| TMHMM | 288 | 310 | 23 | – | – | |
| ProSitePatterns | 306 | 323 | 18 | – | ||
| Phobius | 310 | 320 | 11 | – | – | |
| TMHMM | 317 | 339 | 23 | – | – | |
| Phobius | 321 | 340 | 20 | – | – | |
| Phobius | 341 | 346 | 6 | – | – | |
| Phobius | 347 | 369 | 23 | – | – | |
| TMHMM | 354 | 376 | 23 | – | – | |
| PRINTS | 355 | 376 | 22 | 5.50E-21 | ||
| Phobius | 370 | 388 | 19 | – | – | |
| PRINTS | 378 | 390 | 13 | 5.50E-21 | ||
| Phobius | 389 | 409 | 21 | – | – | |
| Phobius | 410 | 420 | 11 | – | – | |
| TMHMM | 417 | 439 | 23 | – | – | |
| Phobius | 421 | 439 | 19 | – | – | |
| Phobius | 440 | 465 | 26 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0937740.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0937740.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.