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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0937820 |
| Transcript ID | Lj4g3v0937820.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable polyol transporter 3-like [Cicer arietinum] gi|502153311|ref|XP_004509296.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 15 | 15 | – | – | |
| PANTHER | 2 | 486 | 485 | 0 | – | |
| PANTHER | 2 | 486 | 485 | 0 | – | |
| SUPERFAMILY | 10 | 223 | 214 | 4.71E-67 | ||
| TIGRFAM | 16 | 475 | 460 | 2.90E-98 | ||
| Phobius | 16 | 33 | 18 | – | – | |
| ProSiteProfiles | 20 | 468 | 449 | 48.767 | ||
| CDD | 21 | 463 | 443 | 7.23E-28 | ||
| Gene3D | 21 | 202 | 182 | 2.80E-25 | – | |
| Pfam | 21 | 479 | 459 | 1.40E-103 | ||
| TMHMM | 21 | 43 | 23 | – | – | |
| PRINTS | 28 | 38 | 11 | 2.50E-19 | ||
| Phobius | 34 | 57 | 24 | – | – | |
| TMHMM | 58 | 75 | 18 | – | – | |
| Phobius | 58 | 75 | 18 | – | – | |
| ProSitePatterns | 74 | 91 | 18 | – | ||
| Phobius | 76 | 86 | 11 | – | – | |
| Phobius | 87 | 103 | 17 | – | – | |
| TMHMM | 87 | 104 | 18 | – | – | |
| Phobius | 104 | 108 | 5 | – | – | |
| Phobius | 109 | 131 | 23 | – | – | |
| TMHMM | 109 | 131 | 23 | – | – | |
| PRINTS | 111 | 130 | 20 | 2.50E-19 | ||
| ProSitePatterns | 116 | 141 | 26 | – | ||
| Phobius | 132 | 142 | 11 | – | – | |
| Phobius | 143 | 161 | 19 | – | – | |
| TMHMM | 143 | 162 | 20 | – | – | |
| Phobius | 162 | 172 | 11 | – | – | |
| TMHMM | 172 | 194 | 23 | – | – | |
| Phobius | 173 | 196 | 24 | – | – | |
| Phobius | 197 | 312 | 116 | – | – | |
| SUPERFAMILY | 251 | 476 | 226 | 4.71E-67 | ||
| TMHMM | 276 | 298 | 23 | – | – | |
| Gene3D | 276 | 476 | 201 | 6.00E-18 | – | |
| PRINTS | 286 | 296 | 11 | 2.50E-19 | ||
| Phobius | 313 | 334 | 22 | – | – | |
| TMHMM | 313 | 335 | 23 | – | – | |
| Phobius | 335 | 345 | 11 | – | – | |
| TMHMM | 342 | 364 | 23 | – | – | |
| Phobius | 346 | 365 | 20 | – | – | |
| Phobius | 366 | 371 | 6 | – | – | |
| Phobius | 372 | 401 | 30 | – | – | |
| TMHMM | 379 | 401 | 23 | – | – | |
| PRINTS | 380 | 401 | 22 | 2.50E-19 | ||
| Phobius | 402 | 439 | 38 | – | – | |
| PRINTS | 403 | 415 | 13 | 2.50E-19 | ||
| TMHMM | 439 | 461 | 23 | – | – | |
| Phobius | 440 | 464 | 25 | – | – | |
| Phobius | 465 | 490 | 26 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0937820.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0937820.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.