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| Field | Value |
|---|---|
| Gene ID | Lj4g3v0962170 |
| Transcript ID | Lj4g3v0962170.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: sugar transporter ERD6-like 6-like [Glycine max] gi|356559394|ref|XP_003547984.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 392 | 392 | 42.067 | ||
| Phobius | 1 | 5 | 5 | – | – | |
| TIGRFAM | 3 | 399 | 397 | 1.50E-86 | ||
| Pfam | 3 | 403 | 401 | 1.00E-94 | ||
| PANTHER | 3 | 404 | 402 | 0 | – | |
| PANTHER | 3 | 404 | 402 | 0 | – | |
| CDD | 3 | 388 | 386 | 3.00E-12 | ||
| SUPERFAMILY | 3 | 152 | 150 | 1.83E-49 | ||
| Gene3D | 4 | 143 | 140 | 5.90E-20 | – | |
| TMHMM | 4 | 26 | 23 | – | – | |
| Phobius | 6 | 26 | 21 | – | – | |
| ProSitePatterns | 22 | 39 | 18 | – | ||
| Phobius | 27 | 32 | 6 | – | – | |
| Phobius | 33 | 51 | 19 | – | – | |
| TMHMM | 33 | 52 | 20 | – | – | |
| Phobius | 52 | 56 | 5 | – | – | |
| Phobius | 57 | 80 | 24 | – | – | |
| TMHMM | 58 | 80 | 23 | – | – | |
| PRINTS | 59 | 78 | 20 | 5.10E-18 | ||
| ProSitePatterns | 64 | 89 | 26 | – | ||
| Phobius | 81 | 91 | 11 | – | – | |
| TMHMM | 92 | 114 | 23 | – | – | |
| Phobius | 92 | 110 | 19 | – | – | |
| Phobius | 111 | 115 | 5 | – | – | |
| Phobius | 116 | 137 | 22 | – | – | |
| TMHMM | 118 | 137 | 20 | – | – | |
| Phobius | 138 | 196 | 59 | – | – | |
| SUPERFAMILY | 180 | 400 | 221 | 1.83E-49 | ||
| Phobius | 197 | 216 | 20 | – | – | |
| TMHMM | 198 | 220 | 23 | – | – | |
| Gene3D | 202 | 398 | 197 | 2.10E-13 | – | |
| PRINTS | 211 | 221 | 11 | 5.10E-18 | ||
| Phobius | 217 | 235 | 19 | – | – | |
| TMHMM | 235 | 257 | 23 | – | – | |
| Phobius | 236 | 257 | 22 | – | – | |
| Phobius | 258 | 263 | 6 | – | – | |
| Phobius | 264 | 286 | 23 | – | – | |
| TMHMM | 264 | 286 | 23 | – | – | |
| Phobius | 287 | 297 | 11 | – | – | |
| Phobius | 298 | 326 | 29 | – | – | |
| TMHMM | 301 | 323 | 23 | – | – | |
| PRINTS | 305 | 326 | 22 | 5.10E-18 | ||
| Phobius | 327 | 345 | 19 | – | – | |
| PRINTS | 328 | 340 | 13 | 5.10E-18 | ||
| TMHMM | 330 | 352 | 23 | – | – | |
| Phobius | 346 | 364 | 19 | – | – | |
| Phobius | 365 | 369 | 5 | – | – | |
| TMHMM | 367 | 389 | 23 | – | – | |
| Phobius | 370 | 388 | 19 | – | – | |
| Phobius | 389 | 404 | 16 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v0962170.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v0962170.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.