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Lj4g3v1140700.1

Overview

Field Value
Gene ID Lj4g3v1140700
Transcript ID Lj4g3v1140700.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: MND1-interacting protein 1-like [Glycine max] gi|356510649|ref|XP_003524049.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 31 31
PANTHER 1 718 718 0
PANTHER 1 718 718 0
MobiDBLite 48 71 24
Coils 447 488 42
Coils 503 544 42
Coils 566 586 21
Coils 588 622 35
MobiDBLite 613 636 24
Coils 640 660 21
SUPERFAMILY 644 710 67 1.32E-09
Gene3D 650 711 62 2.30E-11
Pfam 661 709 49 2.80E-12
CDD 663 707 45 3.37E-07
SMART 664 703 40 0.0034
ProSiteProfiles 664 704 41 10.704

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj4g3v1140700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1140700.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.