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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1333420 |
| Transcript ID | Lj4g3v1333420.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: multiple C2 and transmembrane domain-containing protein 2-like [Fragaria vesca subsp]. vesca] gi|470118218|ref|XP_004295231.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| ProSiteProfiles | 1 | 76 | 76 | 9.346 | ||
| Phobius | 1 | 191 | 191 | – | – | |
| CDD | 2 | 111 | 110 | 3.00E-54 | – | |
| PANTHER | 2 | 393 | 392 | 9.80E-239 | – | |
| PANTHER | 2 | 393 | 392 | 9.80E-239 | – | |
| SMART | 3 | 91 | 89 | 5.20E-06 | ||
| Gene3D | 6 | 115 | 110 | 5.80E-26 | ||
| Pfam | 6 | 94 | 89 | 6.30E-21 | ||
| SUPERFAMILY | 8 | 116 | 109 | 3.42E-23 | ||
| TMHMM | 190 | 209 | 20 | – | – | |
| Phobius | 192 | 209 | 18 | – | – | |
| Phobius | 210 | 220 | 11 | – | – | |
| Phobius | 221 | 249 | 29 | – | – | |
| TMHMM | 224 | 249 | 26 | – | – | |
| Pfam | 239 | 393 | 155 | 5.20E-66 | ||
| Phobius | 250 | 335 | 86 | – | – | |
| TMHMM | 336 | 358 | 23 | – | – | |
| Phobius | 336 | 365 | 30 | – | – | |
| Phobius | 366 | 393 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj4g3v1333420.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1333420.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.