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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1335070 |
| Transcript ID | Lj4g3v1335070.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B-like [Glycine max] gi|356524618|ref|XP_003530925.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 13 | 13 | – | – | |
| Phobius | 1 | 27 | 27 | – | – | |
| PANTHER | 2 | 546 | 545 | 0 | ||
| PANTHER | 2 | 546 | 545 | 0 | – | |
| Phobius | 14 | 22 | 9 | – | – | |
| Phobius | 23 | 27 | 5 | – | – | |
| Phobius | 28 | 546 | 519 | – | – | |
| MobiDBLite | 36 | 57 | 22 | – | – | |
| Hamap | 65 | 543 | 479 | 37.281 | ||
| TIGRFAM | 65 | 543 | 479 | 9.40E-178 | ||
| SUPERFAMILY | 67 | 364 | 298 | 1.96E-114 | – | |
| Pfam | 68 | 356 | 289 | 2.70E-108 | ||
| ProSitePatterns | 210 | 224 | 15 | – | ||
| SUPERFAMILY | 394 | 543 | 150 | 3.92E-28 | ||
| SMART | 395 | 542 | 148 | 1.80E-70 | ||
| Pfam | 395 | 542 | 148 | 5.80E-51 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Ligase activity | Catalysis of the joining of two substances, or two groups within a single molecule, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate. | ||
| Molecular function | Carbon-nitrogen ligase activity, with glutamine as amido-N-donor | Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction. |
Expression pattern of Lj4g3v1335070.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1335070.1, powered by CORGI.
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