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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1335260 |
| Transcript ID | Lj4g3v1335260.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: MATE efflux family protein DTX1-like [Glycine max] gi|356565297|ref|XP_003550878.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 52 | 52 | – | – | |
| PANTHER | 25 | 503 | 479 | 0 | – | |
| PANTHER | 25 | 503 | 479 | 0 | – | |
| CDD | 46 | 482 | 437 | 3.31E-165 | – | |
| Phobius | 53 | 75 | 23 | – | – | |
| TMHMM | 53 | 75 | 23 | – | – | |
| Pfam | 58 | 216 | 159 | 5.10E-36 | ||
| TIGRFAM | 66 | 453 | 388 | 2.70E-70 | ||
| Phobius | 76 | 80 | 5 | – | – | |
| Phobius | 81 | 101 | 21 | – | – | |
| TMHMM | 82 | 104 | 23 | – | – | |
| Phobius | 102 | 130 | 29 | – | – | |
| TMHMM | 126 | 148 | 23 | – | – | |
| Phobius | 131 | 149 | 19 | – | – | |
| Phobius | 150 | 168 | 19 | – | – | |
| Phobius | 169 | 190 | 22 | – | – | |
| Phobius | 191 | 196 | 6 | – | – | |
| TMHMM | 196 | 218 | 23 | – | – | |
| Phobius | 197 | 217 | 21 | – | – | |
| Phobius | 218 | 222 | 5 | – | – | |
| Phobius | 223 | 249 | 27 | – | – | |
| TMHMM | 228 | 250 | 23 | – | – | |
| Phobius | 250 | 269 | 20 | – | – | |
| Phobius | 270 | 289 | 20 | – | – | |
| TMHMM | 271 | 293 | 23 | – | – | |
| Pfam | 277 | 439 | 163 | 9.00E-36 | ||
| Phobius | 290 | 308 | 19 | – | – | |
| TMHMM | 306 | 328 | 23 | – | – | |
| Phobius | 309 | 328 | 20 | – | – | |
| Phobius | 329 | 347 | 19 | – | – | |
| Phobius | 348 | 372 | 25 | – | – | |
| TMHMM | 348 | 370 | 23 | – | – | |
| Phobius | 373 | 383 | 11 | – | – | |
| Phobius | 384 | 402 | 19 | – | – | |
| TMHMM | 385 | 404 | 20 | – | – | |
| Phobius | 403 | 422 | 20 | – | – | |
| Phobius | 423 | 445 | 23 | – | – | |
| TMHMM | 425 | 447 | 23 | – | – | |
| Phobius | 446 | 450 | 5 | – | – | |
| Phobius | 451 | 472 | 22 | – | – | |
| TMHMM | 452 | 474 | 23 | – | – | |
| Phobius | 473 | 525 | 53 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Antiporter activity | Enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. The reaction is: solute A(out) + solute B(in) = solute A(in) + solute B(out). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Xenobiotic transmembrane transporter activity | Enables the directed movement of a xenobiotic, a compound foreign to living organisms, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1335260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1335260.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.