Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj4g3v1335330.1

Overview

Field Value
Gene ID Lj4g3v1335330
Transcript ID Lj4g3v1335330.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: lysophospholipid acyltransferase 1-like isoform X2 [Cicer arietinum] gi|502176104|ref|XP_004515799.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 467 467 1.60E-215
PANTHER 1 467 467 1.60E-215
Phobius 1 19 19
TMHMM 15 37 23
Phobius 20 40 21
Phobius 41 51 11
TMHMM 49 71 23
Phobius 52 76 25
Phobius 77 87 11
TMHMM 86 108 23
Phobius 88 108 21
Pfam 106 416 311 7.60E-61
Phobius 109 119 11
Phobius 120 139 20
Phobius 140 159 20
Phobius 160 178 19
Phobius 179 210 32
Phobius 211 229 19
Phobius 230 265 36
Phobius 266 287 22
TMHMM 266 288 23
Phobius 288 362 75
TMHMM 358 380 23
Phobius 363 384 22
Phobius 385 395 11
Phobius 396 415 20
TMHMM 401 423 23
Phobius 416 434 19
TMHMM 428 450 23
Phobius 435 453 19
Phobius 454 467 14

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 15

Expression data

Expression pattern

Expression pattern of Lj4g3v1335330.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1335330.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.