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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1355820 |
| Transcript ID | Lj4g3v1355820.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: phosphatidylinositol glycan anchor biosynthesis class U protein-like isoform X2 [Cicer arietinum] gi|502176130|ref|XP_004515804.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 295 | 295 | 2.10E-118 | ||
| Phobius | 1 | 18 | 18 | – | – | |
| Phobius | 1 | 1 | 1 | – | – | |
| Pfam | 2 | 263 | 262 | 7.00E-68 | ||
| Phobius | 2 | 13 | 12 | – | – | |
| TMHMM | 2 | 24 | 23 | – | – | |
| Phobius | 14 | 18 | 5 | – | – | |
| Phobius | 19 | 27 | 9 | – | – | |
| Phobius | 28 | 45 | 18 | – | – | |
| Phobius | 46 | 90 | 45 | – | – | |
| Phobius | 91 | 114 | 24 | – | – | |
| TMHMM | 91 | 113 | 23 | – | – | |
| Phobius | 115 | 125 | 11 | – | – | |
| Phobius | 126 | 145 | 20 | – | – | |
| TMHMM | 126 | 148 | 23 | – | – | |
| Phobius | 146 | 156 | 11 | – | – | |
| TMHMM | 153 | 175 | 23 | – | – | |
| Phobius | 157 | 177 | 21 | – | – | |
| Phobius | 178 | 196 | 19 | – | – | |
| TMHMM | 182 | 201 | 20 | – | – | |
| Phobius | 197 | 216 | 20 | – | – | |
| Phobius | 217 | 222 | 6 | – | – | |
| Phobius | 223 | 248 | 26 | – | – | |
| TMHMM | 224 | 246 | 23 | – | – | |
| Phobius | 249 | 253 | 5 | – | – | |
| TMHMM | 253 | 275 | 23 | – | – | |
| Phobius | 254 | 275 | 22 | – | – | |
| Phobius | 276 | 298 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Attachment of GPI anchor to protein | A transamidation reaction that results in the cleavage of the polypeptide chain and the concomitant transfer of the GPI anchor to the newly formed carboxy-terminal amino acid of the anchored protein. The cleaved C-terminal contains the C-terminal GPI signal sequence of the newly synthesized polypeptide chain. | ||
| Cellular component | GPI-anchor transamidase complex | An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxyl-terminus of a precursor protein to a GPI-anchor. |
Expression pattern of Lj4g3v1355820.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1355820.1, powered by CORGI.
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