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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1388270 |
| Transcript ID | Lj4g3v1388270.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Exocyst complex component [Medicago truncatula] gi|357477099|ref|XP_003608835.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 654 | 653 | 0 | – | |
| PANTHER | 2 | 654 | 653 | 0 | ||
| SUPERFAMILY | 102 | 170 | 69 | 1.52E-155 | ||
| Coils | 135 | 155 | 21 | – | – | |
| SUPERFAMILY | 212 | 647 | 436 | 1.52E-155 | ||
| Pfam | 285 | 643 | 359 | 1.90E-124 | ||
| Coils | 475 | 495 | 21 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Exocyst | A protein complex peripherally associated with the plasma membrane that determines where vesicles dock and fuse. At least eight complex components are conserved between yeast and mammals. | ||
| Biological process | Exocytosis | A process of secretion by a cell that results in the release of intracellular molecules (e.g. hormones, matrix proteins) contained within a membrane-bounded vesicle. Exocytosis can occur either by full fusion, when the vesicle collapses into the plasma membrane, or by a kiss-and-run mechanism that involves the formation of a transient contact, a pore, between a granule (for exemple of chromaffin cells) and the plasma membrane. The latter process most of the time leads to only partial secretion of the granule content. Exocytosis begins with steps that prepare vesicles for fusion with the membrane (tethering and docking) and ends when molecules are secreted from the cell. |
Expression pattern of Lj4g3v1388270.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1388270.1, powered by CORGI.
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