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Lj4g3v1388660.1

Overview

Field Value
Gene ID Lj4g3v1388660
Transcript ID Lj4g3v1388660.1
Related isoforms 3
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: cyclin-dependent kinase G-2-like [Glycine max] gi|356513667|ref|XP_003525532.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
26 59 34 – –
MobiDBLite
mobidb-lite
74 100 27 – –
MobiDBLite
mobidb-lite
112 211 100 – –
PANTHER
PTHR24056:SF107
168 534 367 9.60E-204 –
PANTHER
PTHR24056
168 534 367 9.60E-204 –
Gene3D
G3DSA:3.30.200.20
216 324 109 5.00E-30 –
CDD
cd07843
221 517 297 3.00E-178 –
SUPERFAMILY
SSF56112
221 523 303 6.26E-93
IPR011009
SMART
SM00220
227 517 291 2.90E-91
IPR000719
ProSiteProfiles
PS50011
227 517 291 43.071
IPR000719
Pfam
PF00069
227 517 291 1.10E-68
IPR000719
Gene3D
G3DSA:1.10.510.10
325 522 198 2.50E-56 –
ProSitePatterns
PS00108
346 358 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj4g3v1388660.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1388660.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.