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Lj4g3v1414210.1

Overview

Field Value
Gene ID Lj4g3v1414210
Transcript ID Lj4g3v1414210.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serine/threonine-protein kinase AFC2-like [Cicer arietinum] gi|502176363|ref|XP_004515857.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24058:SF58
1 430 430 0 –
PANTHER
PTHR24058
1 430 430 0 –
Gene3D
G3DSA:3.30.200.20
82 173 92 3.40E-24 –
SUPERFAMILY
SSF56112
85 426 342 3.24E-74
IPR011009
CDD
cd14134
85 423 339 0 –
ProSiteProfiles
PS50011
98 423 326 34.874
IPR000719
SMART
SM00220
98 423 326 1.40E-70
IPR000719
Pfam
PF00069
102 423 322 1.30E-48
IPR000719
Gene3D
G3DSA:1.10.510.10
174 423 250 7.80E-59 –
ProSitePatterns
PS00108
219 231 13 –
IPR008271

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj4g3v1414210.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1414210.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.