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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1536220 |
| Transcript ID | Lj4g3v1536220.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nucleobase-ascorbate transporter 6-like isoform X2 [Cicer arietinum] gi|502152264|ref|XP_004508844.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 242 | 242 | 3.20E-181 | ||
| Pfam | 1 | 152 | 152 | 1.60E-30 | ||
| Phobius | 1 | 3 | 3 | – | – | |
| Phobius | 1 | 17 | 17 | – | – | |
| PANTHER | 1 | 242 | 242 | 3.20E-181 | – | |
| Phobius | 4 | 10 | 7 | – | – | |
| Phobius | 11 | 17 | 7 | – | – | |
| Phobius | 18 | 36 | 19 | – | – | |
| TMHMM | 36 | 58 | 23 | – | – | |
| Phobius | 37 | 55 | 19 | – | – | |
| Phobius | 56 | 75 | 20 | – | – | |
| Phobius | 76 | 98 | 23 | – | – | |
| TMHMM | 79 | 101 | 23 | – | – | |
| Phobius | 99 | 103 | 5 | – | – | |
| Phobius | 104 | 124 | 21 | – | – | |
| TMHMM | 105 | 124 | 20 | – | – | |
| Phobius | 125 | 135 | 11 | – | – | |
| Phobius | 136 | 152 | 17 | – | – | |
| TMHMM | 136 | 158 | 23 | – | – | |
| Phobius | 153 | 242 | 90 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj4g3v1536220.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1536220.3, powered by CORGI.
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