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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1560520 |
| Transcript ID | Lj4g3v1560520.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 21 | 21 | – | – | |
| PANTHER | 8 | 126 | 119 | 1.80E-170 | – | |
| PANTHER | 8 | 126 | 119 | 1.80E-170 | – | |
| SUPERFAMILY | 43 | 132 | 90 | 1.61E-50 | ||
| Gene3D | 43 | 142 | 100 | 5.20E-30 | ||
| SMART | 44 | 83 | 40 | 0.78 | ||
| CDD | 47 | 380 | 334 | 3.62E-41 | – | |
| ProSiteProfiles | 51 | 134 | 84 | 10.786 | ||
| SMART | 89 | 125 | 37 | 0.34 | ||
| ProSiteProfiles | 95 | 134 | 40 | 8.503 | ||
| SMART | 167 | 206 | 40 | 2.30E-06 | ||
| SUPERFAMILY | 172 | 362 | 191 | 1.61E-50 | ||
| ProSiteProfiles | 174 | 346 | 173 | 27.922 | ||
| PANTHER | 174 | 380 | 207 | 1.80E-170 | – | |
| PANTHER | 174 | 380 | 207 | 1.80E-170 | – | |
| ProSiteProfiles | 174 | 215 | 42 | 11.444 | ||
| Pfam | 175 | 205 | 31 | 1.80E-04 | ||
| Gene3D | 175 | 245 | 71 | 5.20E-30 | ||
| PRINTS | 193 | 207 | 15 | 6.20E-05 | ||
| SMART | 209 | 248 | 40 | 7.00E-07 | ||
| Pfam | 212 | 248 | 37 | 6.10E-04 | ||
| ProSiteProfiles | 217 | 257 | 41 | 11.478 | ||
| PRINTS | 235 | 249 | 15 | 6.20E-05 | ||
| Gene3D | 246 | 379 | 134 | 2.30E-24 | ||
| SMART | 255 | 294 | 40 | 0.0012 | ||
| Pfam | 258 | 291 | 34 | 0.015 | ||
| ProSiteProfiles | 262 | 292 | 31 | 8.604 | ||
| SMART | 300 | 337 | 38 | 6.10E-06 | ||
| Pfam | 305 | 336 | 32 | 5.50E-04 | ||
| ProSiteProfiles | 307 | 336 | 30 | 11.244 | ||
| PRINTS | 324 | 338 | 15 | 6.20E-05 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v1560520.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1560520.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.