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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1561700 |
| Transcript ID | Lj4g3v1561700.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: E2F transcription factor-like E2FE-like isoform X1 [Cicer arietinum] gi|502152216|ref|XP_004508820.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 12 | 129 | 118 | 9.20E-205 | – | |
| PANTHER | 12 | 129 | 118 | 9.20E-205 | ||
| Gene3D | 18 | 88 | 71 | 1.70E-26 | ||
| SUPERFAMILY | 21 | 85 | 65 | 1.46E-16 | ||
| SMART | 22 | 87 | 66 | 4.60E-29 | ||
| Pfam | 23 | 87 | 65 | 4.10E-21 | ||
| MobiDBLite | 104 | 155 | 52 | – | – | |
| PANTHER | 150 | 380 | 231 | 9.20E-205 | – | |
| PANTHER | 150 | 380 | 231 | 9.20E-205 | ||
| Gene3D | 152 | 238 | 87 | 2.60E-23 | ||
| SMART | 156 | 236 | 81 | 1.40E-30 | ||
| Pfam | 158 | 236 | 79 | 6.90E-18 | ||
| SUPERFAMILY | 158 | 237 | 80 | 3.27E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Cellular component | Transcription factor complex | A protein complex that is capable of associating with DNA by direct binding, or via other DNA-binding proteins or complexes, and regulating transcription. | ||
| Biological process | Regulation of transcription, DNA-templated | Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription. |
Expression pattern of Lj4g3v1561700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1561700.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.