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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1614760 |
| Transcript ID | Lj4g3v1614760.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: multiple C2 and transmembrane domain-containing protein 2-like [Cicer arietinum] gi|502152114|ref|XP_004508771.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 818 | 818 | – | – | |
| Gene3D | 14 | 146 | 133 | 1.70E-26 | ||
| SMART | 18 | 123 | 106 | 8.30E-14 | ||
| SUPERFAMILY | 18 | 165 | 148 | 7.40E-26 | ||
| ProSiteProfiles | 18 | 108 | 91 | 14.956 | ||
| CDD | 18 | 148 | 131 | 3.54E-63 | – | |
| Pfam | 18 | 113 | 96 | 2.00E-18 | ||
| PANTHER | 282 | 825 | 544 | 0 | – | |
| PANTHER | 282 | 825 | 544 | 0 | – | |
| Gene3D | 293 | 421 | 129 | 6.60E-17 | ||
| SUPERFAMILY | 294 | 439 | 146 | 4.70E-17 | ||
| SMART | 294 | 391 | 98 | 1.60E-12 | ||
| Pfam | 294 | 397 | 104 | 2.80E-07 | ||
| CDD | 294 | 423 | 130 | 3.69E-51 | – | |
| Gene3D | 443 | 573 | 131 | 3.10E-14 | ||
| SUPERFAMILY | 454 | 600 | 147 | 1.85E-19 | ||
| Pfam | 454 | 564 | 111 | 2.20E-09 | ||
| CDD | 455 | 598 | 144 | 2.80E-59 | – | |
| SMART | 455 | 557 | 103 | 5.10E-04 | ||
| ProSiteProfiles | 456 | 542 | 87 | 8.666 | ||
| Gene3D | 574 | 721 | 148 | 3.20E-26 | ||
| SUPERFAMILY | 609 | 761 | 153 | 4.98E-27 | ||
| Pfam | 609 | 720 | 112 | 9.00E-24 | ||
| CDD | 610 | 737 | 128 | 1.88E-63 | – | |
| SMART | 610 | 717 | 108 | 1.10E-12 | ||
| ProSiteProfiles | 611 | 702 | 92 | 9.776 | ||
| Phobius | 819 | 836 | 18 | – | – | |
| Phobius | 837 | 847 | 11 | – | – | |
| Phobius | 848 | 881 | 34 | – | – | |
| TMHMM | 859 | 881 | 23 | – | – | |
| Pfam | 866 | 1021 | 156 | 6.00E-70 | ||
| Phobius | 882 | 963 | 82 | – | – | |
| PANTHER | 897 | 1017 | 121 | 0 | – | |
| PANTHER | 897 | 1017 | 121 | 0 | – | |
| Phobius | 964 | 993 | 30 | – | – | |
| TMHMM | 966 | 988 | 23 | – | – | |
| Phobius | 994 | 1021 | 28 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj4g3v1614760.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1614760.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.