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Lj4g3v1683260.1

Overview

Field Value
Gene ID Lj4g3v1683260
Transcript ID Lj4g3v1683260.1
Lotus japonicus genome version MG20 v3.0
Description Uncharacterized protein isoform 3 [Theobroma cacao] gi|508774726|gb|EOY21982.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 971 971
PANTHER 25 209 185 0
PANTHER 25 209 185 0
MobiDBLite 29 95 67
PANTHER 364 1247 884 0
PANTHER 364 1247 884 0
Pfam 378 480 103 6.70E-17
MobiDBLite 519 551 33
MobiDBLite 622 658 37
Coils 717 737 21
Coils 854 932 79
MobiDBLite 941 973 33
Phobius 972 991 20
Phobius 992 1385 394
PANTHER 1291 1580 290 0
PANTHER 1291 1580 290 0
MobiDBLite 1331 1355 25
Phobius 1386 1412 27
Phobius 1413 1431 19
Phobius 1432 1451 20
Phobius 1452 1580 129

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj4g3v1683260.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1683260.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.