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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1720850 |
| Transcript ID | Lj4g3v1720850.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ras GTPase-activating protein-binding protein 1-like [Fragaria vesca subsp]. vesca] gi|470126648|ref|XP_004299295.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 398 | 398 | 1.10E-204 | – | |
| CDD | 1 | 81 | 81 | 1.53E-28 | ||
| PANTHER | 1 | 398 | 398 | 1.10E-204 | – | |
| ProSiteProfiles | 1 | 79 | 79 | 21.869 | ||
| Gene3D | 2 | 83 | 82 | 4.40E-25 | ||
| SUPERFAMILY | 3 | 80 | 78 | 3.70E-22 | ||
| Pfam | 3 | 79 | 77 | 3.60E-19 | ||
| MobiDBLite | 111 | 145 | 35 | – | – | |
| MobiDBLite | 209 | 244 | 36 | – | – | |
| Gene3D | 233 | 341 | 109 | 6.00E-16 | ||
| SUPERFAMILY | 246 | 354 | 109 | 2.55E-19 | ||
| ProSiteProfiles | 248 | 324 | 77 | 12.884 | ||
| SMART | 249 | 320 | 72 | 1.20E-12 | ||
| CDD | 250 | 307 | 58 | 3.92E-13 | – | |
| Pfam | 250 | 307 | 58 | 2.30E-12 | ||
| MobiDBLite | 318 | 401 | 84 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of Lj4g3v1720850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1720850.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.