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Lj4g3v1774710.1

Overview

Field Value
Gene ID Lj4g3v1774710
Transcript ID Lj4g3v1774710.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: kinesin-like protein KIF18B-like [Glycine max] gi|356565244|ref|XP_003550852.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR24115:SF372
47 103 57 1.30E-236 –
PANTHER
PTHR24115
47 103 57 1.30E-236
IPR027640
PANTHER
PTHR24115:SF372
119 519 401 1.30E-236 –
PANTHER
PTHR24115
119 519 401 1.30E-236
IPR027640
Gene3D
G3DSA:3.40.850.10
133 467 335 2.70E-116
IPR001752
SMART
SM00129
135 475 341 2.90E-129
IPR001752
ProSiteProfiles
PS50067
137 467 331 109.296
IPR001752
SUPERFAMILY
SSF52540
137 512 376 2.41E-110
IPR027417
Pfam
PF00225
143 467 325 6.10E-104
IPR001752
PRINTS
PR00380
220 241 22 2.50E-35
IPR001752
PRINTS
PR00380
334 351 18 2.50E-35
IPR001752
ProSitePatterns
PS00411
367 378 12 –
IPR019821
PRINTS
PR00380
368 386 19 2.50E-35
IPR001752
PRINTS
PR00380
417 438 22 2.50E-35
IPR001752
Coils
Coil
492 519 28 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003777
Molecular function Microtubule motor activity Catalysis of movement along a microtubule, coupled to the hydrolysis of a nucleoside triphosphate (usually ATP).
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0007018
Biological process Microtubule-based movement A microtubule-based process that results in the movement of organelles, other microtubules, or other cellular components. Examples include motor-driven movement along microtubules and movement driven by polymerization or depolymerization of microtubules.
Subterm of
GO:0008017
Molecular function Microtubule binding Interacting selectively and non-covalently with microtubules, filaments composed of tubulin monomers.
Subterm of

Genome browser

LORE1 insertions 17

Expression data

Expression pattern

Expression pattern of Lj4g3v1774710.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1774710.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.