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Lj4g3v1876850.1

Overview

Field Value
Gene ID Lj4g3v1876850
Transcript ID Lj4g3v1876850.1
Lotus japonicus genome version MG20 v3.0
Description Dynein light chain [Medicago truncatula] gi|357478003|ref|XP_003609287.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11886:SF51
137 228 92 1.70E-49 –
PANTHER
PTHR11886
137 228 92 1.70E-49
IPR001372
SMART
SM01375
167 233 67 2.00E-10
IPR001372
SUPERFAMILY
SSF54648
170 228 59 3.27E-15 –
Pfam
PF01221
172 228 57 5.30E-16
IPR001372
Gene3D
G3DSA:3.30.740.10
172 228 57 7.40E-15
IPR001372

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0007017
Biological process Microtubule-based process Any cellular process that depends upon or alters the microtubule cytoskeleton, that part of the cytoskeleton comprising microtubules and their associated proteins.
Subterm of
GO:0030286
Cellular component Dynein complex Any of several large complexes that contain two or three dynein heavy chains and several light chains, and have microtubule motor activity.
Subterm of

Genome browser

LORE1 insertions 25

Expression data

Expression pattern

Expression pattern of Lj4g3v1876850.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v1876850.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.