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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001372
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 23 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.411s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0056979.1
n.a. Dynein light chain [Medicago truncatula] gi|357478003|ref|XP_003609287.1| chr0 18585818 18588479 -
5 domain predictions
2 GO terms
Lj0g3v0107629.1
n.a. PREDICTED: dynein light chain, cytoplasmic-like [Glycine max] gi|356498709|ref|XP_003518192.1| chr0 46436139 46440442 -
5 domain predictions
2 GO terms
Lj0g3v0107639.1
n.a. PREDICTED: dynein light chain LC6, flagellar outer arm-like [Glycine max] gi|356513084|ref|XP_003525244.1| chr0 46439888 46440442 -
2 domain predictions
2 GO terms
Lj0g3v0199139.2
n.a. PREDICTED: dynein light chain 2, cytoplasmic-like [Cicer arietinum] gi|502155274|ref|XP_004510015.1| chr0 97560114 97561447 -
5 domain predictions
2 GO terms
Lj0g3v0318559.1
n.a. Dynein light chain 1 cytoplasmic-like protein [Medicago truncatula] gi|357478823|ref|XP_003609697.1| chr0 166368673 166371252 +
5 domain predictions
2 GO terms
Lj1g3v1596900.1
n.a. PREDICTED: LOW QUALITY PROTEIN: dynein light chain LC6, flagellar outer arm-like [Glycine max] gi|356543152|ref|XP_003540027.1| chr1 19113915 19114359 +
5 domain predictions
2 GO terms
Lj1g3v3443700.1
n.a. PREDICTED: dynein light chain LC6, flagellar outer arm-like [Cicer arietinum] gi|502176825|ref|XP_004515947.1| chr1 39792583 39794770 -
5 domain predictions
2 GO terms
Lj2g3v3034030.1
n.a. PREDICTED: dynein light chain LC6, flagellar outer arm-like [Glycine max] gi|356513084|ref|XP_003525244.1| chr2 39195649 39198146 +
5 domain predictions
2 GO terms
Lj3g3v0235160.1
n.a. PREDICTED: probable dynein light chain-like [Cicer arietinum] gi|502081025|ref|XP_004486743.1| chr3 1429676 1430700 +
5 domain predictions
2 GO terms
Lj4g3v1599240.1
n.a. dynein light chain [Vicia faba] gi|66796189|dbj|BAD99112.1| chr4 23505482 23507463 -
5 domain predictions
2 GO terms
Lj4g3v1876850.1
n.a. Dynein light chain [Medicago truncatula] gi|357478003|ref|XP_003609287.1| chr4 25742272 25744933 -
5 domain predictions
2 GO terms
Lj6g3v1465040.1
n.a. PREDICTED: dynein light chain 2, cytoplasmic-like [Glycine max] gi|356556098|ref|XP_003546364.1| chr6 17216028 17216545 +
2 domain predictions
2 GO terms
LotjaGi1g1v0577900.1
n.a. Dynein light chain family protein; TAIR: AT1G52245.1 dynein light chain LC6, flagellar outer arm-like protein; Swiss-Prot: sp|Q6BZF8|DYL1_DEBHA Dynein light chain 1, cytoplasmic; TrEMBL-Plants: tr|K7L1L1|K7L1L1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0577900 LjG1.1_chr1 111759235 111761822 -
4 domain predictions
2 GO terms
LotjaGi2g1v0066500.1
n.a. Dynein light chain; TAIR: AT1G23220.1 Dynein light chain type 1 family protein; Swiss-Prot: sp|O02414|DYL1_HELCR Dynein light chain LC6, flagellar outer arm; TrEMBL-Plants: tr|A0A0L9T8D0|A0A0L9T8D0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0066500 LjG1.1_chr2 15616063 15620747 +
4 domain predictions
2 GO terms
LotjaGi3g1v0017900.1
n.a. Dynein light chain family protein; TAIR: AT1G52245.1 dynein light chain LC6, flagellar outer arm-like protein; Swiss-Prot: sp|Q94748|DYL2_SCHMA Probable dynein light chain; TrEMBL-Plants: tr|A0A059BUK3|A0A059BUK3_EUCGR Uncharacterized protein; Found in the gene: LotjaGi3g1v0017900 LjG1.1_chr3 1886257 1886953 +
4 domain predictions
2 GO terms
LotjaGi3g1v0017900.2
n.a. Dynein light chain family protein; TAIR: AT1G52245.1 dynein light chain LC6, flagellar outer arm-like protein; Swiss-Prot: sp|Q94748|DYL2_SCHMA Probable dynein light chain; TrEMBL-Plants: tr|A0A059BUK3|A0A059BUK3_EUCGR Uncharacterized protein; Found in the gene: LotjaGi3g1v0017900 LjG1.1_chr3 1886274 1886803 +
4 domain predictions
2 GO terms
LotjaGi3g1v0079200.1
n.a. Dynein light chain family protein; TAIR: AT4G27360.1 Dynein light chain type 1 family protein; Swiss-Prot: sp|O02414|DYL1_HELCR Dynein light chain LC6, flagellar outer arm; TrEMBL-Plants: tr|V7AI56|V7AI56_PHAVU Uncharacterized protein; Found in the gene: LotjaGi3g1v0079200 LjG1.1_chr3 8710756 8713734 -
4 domain predictions
2 GO terms
LotjaGi3g1v0325400.1
n.a. Dynein light chain family protein; TAIR: AT4G27360.1 Dynein light chain type 1 family protein; Swiss-Prot: sp|O02414|DYL1_HELCR Dynein light chain LC6, flagellar outer arm; TrEMBL-Plants: tr|I3SK05|I3SK05_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0325400 LjG1.1_chr3 69245754 69246680 -
4 domain predictions
2 GO terms
LotjaGi4g1v0243900.1
n.a. Dynein light chain; TAIR: AT5G20110.1 Dynein light chain type 1 family protein; Swiss-Prot: sp|O02414|DYL1_HELCR Dynein light chain LC6, flagellar outer arm; TrEMBL-Plants: tr|Q4W5W8|Q4W5W8_VICFA Dynein light chain; Found in the gene: LotjaGi4g1v0243900 LjG1.1_chr4 59549254 59552000 -
4 domain predictions
2 GO terms
LotjaGi4g1v0269200.1
n.a. Dynein light chain-like protein; TAIR: AT5G20110.1 Dynein light chain type 1 family protein; Swiss-Prot: sp|Q86A88|DYL_DICDI Dynein light chain, cytoplasmic; TrEMBL-Plants: tr|G7JVC8|G7JVC8_MEDTR Dynein light chain type 1 family protein; Found in the gene: LotjaGi4g1v0269200 LjG1.1_chr4 63464208 63470844 -
4 domain predictions
2 GO terms
LotjaGi4g1v0339200.1
n.a. Dynein light chain; TAIR: AT4G15930.1 Dynein light chain type 1 family protein; Swiss-Prot: sp|Q39580|DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm; TrEMBL-Plants: tr|I3SWD9|I3SWD9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0339200 LjG1.1_chr4 71920783 71923876 -
4 domain predictions
2 GO terms
LotjaGi4g1v0455400.1
n.a. Dynein light chain; TAIR: AT1G23220.1 Dynein light chain type 1 family protein; Swiss-Prot: sp|Q86A88|DYL_DICDI Dynein light chain, cytoplasmic; TrEMBL-Plants: tr|C6SVJ0|C6SVJ0_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi4g1v0455400 LjG1.1_chr4 82697700 82699556 +
4 domain predictions
2 GO terms
LotjaGi6g1v0251500.1
n.a. Dynein light chain; TAIR: AT4G15930.1 Dynein light chain type 1 family protein; Swiss-Prot: sp|Q39580|DYL1_CHLRE Dynein 8 kDa light chain, flagellar outer arm; TrEMBL-Plants: tr|I1MGN0|I1MGN0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0251500 LjG1.1_chr6 56336123 56347793 +
4 domain predictions
2 GO terms