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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1881610 |
| Transcript ID | Lj4g3v1881610.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: calmodulin-like protein 5-like [Glycine max] gi|356562975|ref|XP_003549743.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 5 | 5 | – | – | |
| Phobius | 6 | 28 | 23 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 29 | 222 | 194 | – | – | |
| ProSiteProfiles | 64 | 99 | 36 | 15.099 | ||
| SUPERFAMILY | 65 | 214 | 150 | 1.03E-40 | ||
| Gene3D | 65 | 121 | 57 | 8.00E-21 | ||
| PANTHER | 65 | 220 | 156 | 4.70E-85 | – | |
| PANTHER | 65 | 220 | 156 | 4.70E-85 | – | |
| Pfam | 67 | 126 | 60 | 3.70E-15 | ||
| CDD | 68 | 126 | 59 | 1.25E-15 | ||
| SMART | 68 | 96 | 29 | 2.60E-06 | ||
| ProSitePatterns | 77 | 89 | 13 | – | ||
| ProSiteProfiles | 100 | 135 | 36 | 10.971 | ||
| SMART | 104 | 132 | 29 | 0.14 | ||
| ProSitePatterns | 113 | 125 | 13 | – | ||
| Gene3D | 122 | 213 | 92 | 3.50E-23 | ||
| ProSiteProfiles | 145 | 180 | 36 | 14.792 | ||
| SMART | 149 | 177 | 29 | 8.00E-05 | ||
| CDD | 150 | 212 | 63 | 2.47E-17 | ||
| Pfam | 150 | 212 | 63 | 1.80E-12 | ||
| ProSitePatterns | 158 | 170 | 13 | – | ||
| ProSiteProfiles | 183 | 218 | 36 | 14.792 | ||
| SMART | 187 | 215 | 29 | 1.50E-05 | ||
| ProSitePatterns | 196 | 208 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj4g3v1881610.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1881610.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.