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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1936570 |
| Transcript ID | Lj4g3v1936570.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | tonoplast proton pump [Lotus corniculatus] gi|151337717|gb|ABS01290.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 41 | 41 | 0 | – | |
| Phobius | 1 | 12 | 12 | – | – | |
| PANTHER | 1 | 41 | 41 | 0 | – | |
| Hamap | 9 | 758 | 750 | 23.081 | ||
| TMHMM | 10 | 32 | 23 | – | – | |
| TIGRFAM | 11 | 763 | 753 | 0 | ||
| PIRSF | 11 | 766 | 756 | 2.80E-282 | ||
| Phobius | 13 | 33 | 21 | – | – | |
| Pfam | 21 | 753 | 733 | 1.30E-259 | ||
| Phobius | 34 | 96 | 63 | – | – | |
| PANTHER | 62 | 767 | 706 | 0 | – | |
| PANTHER | 62 | 767 | 706 | 0 | – | |
| Phobius | 97 | 116 | 20 | – | – | |
| TMHMM | 97 | 119 | 23 | – | – | |
| Phobius | 117 | 135 | 19 | – | – | |
| Phobius | 136 | 163 | 28 | – | – | |
| TMHMM | 139 | 161 | 23 | – | – | |
| Phobius | 164 | 183 | 20 | – | – | |
| Phobius | 184 | 210 | 27 | – | – | |
| TMHMM | 196 | 218 | 23 | – | – | |
| Phobius | 211 | 221 | 11 | – | – | |
| Phobius | 222 | 242 | 21 | – | – | |
| TMHMM | 228 | 250 | 23 | – | – | |
| Phobius | 243 | 300 | 58 | – | – | |
| TMHMM | 297 | 319 | 23 | – | – | |
| Phobius | 301 | 319 | 19 | – | – | |
| Phobius | 320 | 324 | 5 | – | – | |
| TMHMM | 324 | 346 | 23 | – | – | |
| Phobius | 325 | 347 | 23 | – | – | |
| Phobius | 348 | 366 | 19 | – | – | |
| Phobius | 367 | 385 | 19 | – | – | |
| TMHMM | 367 | 389 | 23 | – | – | |
| Phobius | 386 | 404 | 19 | – | – | |
| TMHMM | 404 | 423 | 20 | – | – | |
| Phobius | 405 | 428 | 24 | – | – | |
| Phobius | 429 | 448 | 20 | – | – | |
| Phobius | 449 | 474 | 26 | – | – | |
| TMHMM | 452 | 474 | 23 | – | – | |
| Phobius | 475 | 479 | 5 | – | – | |
| TMHMM | 479 | 501 | 23 | – | – | |
| Phobius | 480 | 501 | 22 | – | – | |
| Phobius | 502 | 544 | 43 | – | – | |
| TMHMM | 540 | 562 | 23 | – | – | |
| Phobius | 545 | 565 | 21 | – | – | |
| Phobius | 566 | 576 | 11 | – | – | |
| Phobius | 577 | 596 | 20 | – | – | |
| TMHMM | 577 | 594 | 18 | – | – | |
| Phobius | 597 | 643 | 47 | – | – | |
| Phobius | 644 | 664 | 21 | – | – | |
| TMHMM | 649 | 671 | 23 | – | – | |
| Phobius | 665 | 740 | 76 | – | – | |
| Phobius | 741 | 765 | 25 | – | – | |
| Phobius | 766 | 767 | 2 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Inorganic diphosphatase activity | Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate. | ||
| Molecular function | Hydrogen-translocating pyrophosphatase activity | Catalysis of the hydrolysis of pyrophosphate, which generates a proton motive force. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Proton transmembrane transport | The directed movement of a proton across a membrane. |
Expression pattern of Lj4g3v1936570.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1936570.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.