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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1947730 |
| Transcript ID | Lj4g3v1947730.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | F-box/LRR-repeat protein [Medicago truncatula] gi|357478391|ref|XP_003609481.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 47 | 66 | 20 | 2.20E-11 | ||
| PANTHER | 49 | 60 | 12 | 2.70E-162 | – | |
| PANTHER | 49 | 60 | 12 | 2.70E-162 | – | |
| PANTHER | 79 | 180 | 102 | 2.70E-162 | – | |
| PANTHER | 79 | 180 | 102 | 2.70E-162 | – | |
| Gene3D | 98 | 233 | 136 | 2.20E-11 | ||
| Pfam | 132 | 152 | 21 | 1 | ||
| SUPERFAMILY | 132 | 444 | 313 | 1.10E-44 | – | |
| SMART | 155 | 180 | 26 | 5.6 | ||
| SMART | 181 | 205 | 25 | 58 | ||
| PANTHER | 205 | 451 | 247 | 2.70E-162 | – | |
| PANTHER | 205 | 451 | 247 | 2.70E-162 | – | |
| SMART | 229 | 254 | 26 | 25 | ||
| Gene3D | 234 | 447 | 214 | 3.00E-41 | ||
| SMART | 256 | 278 | 23 | 300 | ||
| Pfam | 305 | 363 | 59 | 1.20E-07 | ||
| SMART | 350 | 374 | 25 | 5.4 | ||
| SMART | 398 | 422 | 25 | 19 | ||
| Pfam | 399 | 420 | 22 | 0.23 | ||
| SMART | 423 | 446 | 24 | 280 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v1947730.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1947730.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.