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| Field | Value |
|---|---|
| Gene ID | Lj4g3v2120410 |
| Transcript ID | Lj4g3v2120410.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: WD repeat-containing protein 75-like [Cicer arietinum] gi|502150260|ref|XP_004507867.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 37 | 37 | – | – | |
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 1 | 239 | 239 | 1.90E-230 | – | |
| PANTHER | 1 | 239 | 239 | 1.90E-230 | – | |
| SignalP | 1 | 42 | 42 | – | – | |
| Gene3D | 13 | 100 | 88 | 8.60E-12 | ||
| SUPERFAMILY | 13 | 91 | 79 | 1.60E-32 | ||
| Phobius | 21 | 32 | 12 | – | – | |
| Phobius | 33 | 37 | 5 | – | – | |
| SMART | 36 | 79 | 44 | 0.0032 | ||
| Phobius | 38 | 801 | 764 | – | – | |
| Pfam | 42 | 79 | 38 | 0.21 | ||
| ProSiteProfiles | 43 | 88 | 46 | 9.441 | ||
| ProSiteProfiles | 43 | 88 | 46 | 9.606 | ||
| Gene3D | 155 | 370 | 216 | 3.50E-20 | ||
| SUPERFAMILY | 159 | 232 | 74 | 1.60E-32 | ||
| SMART | 193 | 233 | 41 | 0.024 | ||
| ProSiteProfiles | 201 | 232 | 32 | 8.604 | ||
| MobiDBLite | 246 | 266 | 21 | – | – | |
| SUPERFAMILY | 263 | 311 | 49 | 1.60E-32 | ||
| SMART | 266 | 305 | 40 | 2.50E-04 | ||
| PANTHER | 266 | 617 | 352 | 1.90E-230 | – | |
| SUPERFAMILY | 266 | 407 | 142 | 1.03E-10 | ||
| PANTHER | 266 | 617 | 352 | 1.90E-230 | – | |
| ProSiteProfiles | 273 | 314 | 42 | 11.645 | ||
| ProSiteProfiles | 273 | 314 | 42 | 11.049 | ||
| Pfam | 274 | 304 | 31 | 0.007 | ||
| Gene3D | 455 | 677 | 223 | 1.40E-16 | ||
| SMART | 467 | 507 | 41 | 2.4 | ||
| SUPERFAMILY | 471 | 598 | 128 | 1.60E-32 | ||
| SMART | 523 | 561 | 39 | 3.8 | ||
| SUPERFAMILY | 538 | 764 | 227 | 3.40E-05 | – | |
| PANTHER | 633 | 731 | 99 | 1.90E-230 | – | |
| PANTHER | 633 | 731 | 99 | 1.90E-230 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of Lj4g3v2120410.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v2120410.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.