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Lj4g3v2313490.1

Overview

Field Value
Gene ID Lj4g3v2313490
Transcript ID Lj4g3v2313490.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ZF-HD homeobox protein At4g24660-like [Cicer arietinum] gi|502161149|ref|XP_004512050.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31948:SF8
14 189 176 1.20E-36 –
PANTHER
PTHR31948
14 189 176 1.20E-36 –
ProDom
PD125774
17 67 51 1.00E-09
IPR006456
Pfam
PF04770
17 70 54 1.10E-17
IPR006456
ProSiteProfiles
PS51523
19 70 52 18.509
IPR006456
TIGRFAM
TIGR01566
19 68 50 1.60E-16
IPR006456
MobiDBLite
mobidb-lite
76 95 20 – –
SUPERFAMILY
SSF46689
116 182 67 3.33E-09
IPR009057
Gene3D
G3DSA:1.10.10.60
118 183 66 4.30E-15
IPR009057
TIGRFAM
TIGR01565
121 177 57 1.20E-16
IPR006455

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj4g3v2313490.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj4g3v2313490.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.